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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

CHARMM-GUI supports the Amber force fields
Jumin Lee, Manuel Hitzenberger, Manuel Rieger, et al.
The Journal of Chemical Physics (2020) Vol. 153, Iss. 3
Open Access | Times Cited: 280

Showing 1-25 of 280 citing articles:

Molecular recognition of morphine and fentanyl by the human μ-opioid receptor
Youwen Zhuang, Yue Wang, Bingqing He, et al.
Cell (2022) Vol. 185, Iss. 23, pp. 4361-4375.e19
Open Access | Times Cited: 155
CHARMM-GUI Nanomaterial Modeler for Modeling and Simulation of Nanomaterial Systems
Yeol Kyo Choi, Nathan R. Kern, Seonghan Kim, et al.
Journal of Chemical Theory and Computation (2021) Vol. 18, Iss. 1, pp. 479-493
Open Access | Times Cited: 121
CHARMM-GUI PDB Manipulator: Various PDB Structural Modifications for Biomolecular Modeling and Simulation
Sang‐Jun Park, Nathan R. Kern, Turner Brown, et al.
Journal of Molecular Biology (2023) Vol. 435, Iss. 14, pp. 167995-167995
Open Access | Times Cited: 80
CHARMM at 45: Enhancements in Accessibility, Functionality, and Speed
Wonmuk Hwang, Steven L. Austin, Arnaud Blondel, et al.
The Journal of Physical Chemistry B (2024) Vol. 128, Iss. 41, pp. 9976-10042
Open Access | Times Cited: 22
CHARMM-GUI Supports Hydrogen Mass Repartitioning and Different Protonation States of Phosphates in Lipopolysaccharides
Ya Gao, Jumin Lee, Iain P. S. Smith, et al.
Journal of Chemical Information and Modeling (2021) Vol. 61, Iss. 2, pp. 831-839
Open Access | Times Cited: 99
CHARMM-GUI Free Energy Calculator for Absolute and Relative Ligand Solvation and Binding Free Energy Simulations
Seonghoon Kim, Hiraku Oshima, Han Zhang, et al.
Journal of Chemical Theory and Computation (2020) Vol. 16, Iss. 11, pp. 7207-7218
Open Access | Times Cited: 93
In silico analyses on the comparative sensing of SARS‐CoV‐2 mRNA by the intracellular TLRs of humans
Abhigyan Choudhury, Nabarun Chandra Das, Ritwik Patra, et al.
Journal of Medical Virology (2021) Vol. 93, Iss. 4, pp. 2476-2486
Closed Access | Times Cited: 93
High-resolution structure and dynamics of mitochondrial complex I—Insights into the proton pumping mechanism
Kristian Parey, Jonathan Lasham, Deryck J. Mills, et al.
Science Advances (2021) Vol. 7, Iss. 46
Open Access | Times Cited: 92
O-GlcNAcylation promotes pancreatic tumor growth by regulating malate dehydrogenase 1
Qiang Zhu, Hong Zhou, Liming Wu, et al.
Nature Chemical Biology (2022) Vol. 18, Iss. 10, pp. 1087-1095
Closed Access | Times Cited: 64
Methotrexate recognition by the human reduced folate carrier SLC19A1
Nicholas J. Wright, Justin G. Fedor, Han Zhang, et al.
Nature (2022) Vol. 609, Iss. 7929, pp. 1056-1062
Open Access | Times Cited: 43
CHARMM-GUI Membrane Builder: Past, Current, and Future Developments and Applications
Shasha Feng, Soohyung Park, Yeol Kyo Choi, et al.
Journal of Chemical Theory and Computation (2023) Vol. 19, Iss. 8, pp. 2161-2185
Open Access | Times Cited: 41
Mechanism of activation and biased signaling in complement receptor C5aR1
Yuying Feng, Chang Zhao, Yue Deng, et al.
Cell Research (2023) Vol. 33, Iss. 4, pp. 312-324
Open Access | Times Cited: 37
Mechanism of hormone and allosteric agonist mediated activation of follicle stimulating hormone receptor
Jia Duan, Peiyu Xu, Huibing Zhang, et al.
Nature Communications (2023) Vol. 14, Iss. 1
Open Access | Times Cited: 34
Structural insights into ligand recognition and activation of the medium-chain fatty acid-sensing receptor GPR84
Heng Liu, Qing Zhang, Xinheng He, et al.
Nature Communications (2023) Vol. 14, Iss. 1
Open Access | Times Cited: 28
A Perspective on Sustainable Computational Chemistry Software Development and Integration
Rosa Di Felice, Maricris L. Mayes, Ryan M. Richard, et al.
Journal of Chemical Theory and Computation (2023) Vol. 19, Iss. 20, pp. 7056-7076
Open Access | Times Cited: 28
Vanillin-Based Indolin-2-one Derivative Bearing a Pyridyl Moiety as a Promising Anti-Breast Cancer Agent via Anti-Estrogenic Activity
Onur Bender, İsmail Çeli̇k, Rumeysa Dogan, et al.
ACS Omega (2023) Vol. 8, Iss. 7, pp. 6968-6981
Open Access | Times Cited: 26
CHARMM-GUI Multicomponent Assembler for modeling and simulation of complex multicomponent systems
Nathan R. Kern, Jumin Lee, Yeol Kyo Choi, et al.
Nature Communications (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 15
Structural basis for the ligand recognition and signaling of free fatty acid receptors
Xuan Zhang, Abdul-Akim Guseinov, Laura Jenkins, et al.
Science Advances (2024) Vol. 10, Iss. 2
Open Access | Times Cited: 10
Structural basis of tolvaptan binding to the vasopressin V2 receptor
Hongli Liu, Haiyang Zhong, Yixiao Zhang, et al.
Acta Pharmacologica Sinica (2024) Vol. 45, Iss. 11, pp. 2441-2449
Closed Access | Times Cited: 10
A single mutation in dairy cow-associated H5N1 viruses increases receptor binding breadth
Marina R. Good, Wei Ji, Monica L. Fernández‐Quintero, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 10
A single mutation in dairy cow-associated H5N1 viruses increases receptor binding breadth
Marina R. Good, Monica L. Fernández‐Quintero, Wei Ji, et al.
Nature Communications (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 10
Chemical Logic of Peptide Branching by Iterative Nonlinear Nonribosomal Peptide Synthetases
Jinping Yang, Adam Balutowski, Chinmay Trivedi, et al.
Biochemistry (2025)
Closed Access | Times Cited: 1
Classical molecular dynamics
Charles L. Brooks, David A. Case, Steven J. Plimpton, et al.
The Journal of Chemical Physics (2021) Vol. 154, Iss. 10
Open Access | Times Cited: 44
CHARMM-GUI Free Energy Calculator for Practical Ligand Binding Free Energy Simulations with AMBER
Han Zhang, Seonghoon Kim, Timothy J. Giese, et al.
Journal of Chemical Information and Modeling (2021) Vol. 61, Iss. 9, pp. 4145-4151
Open Access | Times Cited: 43
Structural insights into adhesion GPCR ADGRL3 activation and Gq, Gs, Gi, and G12 coupling
Qian Yu, Zhengxiong Ma, Chunhong Liu, et al.
Molecular Cell (2022) Vol. 82, Iss. 22, pp. 4340-4352.e6
Open Access | Times Cited: 37
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