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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Codon usage is an important determinant of gene expression levels largely through its effects on transcription
Zhipeng Zhou, Yunkun Dang, Mian Zhou, et al.
Proceedings of the National Academy of Sciences (2016) Vol. 113, Iss. 41
Open Access | Times Cited: 408

Showing 1-25 of 408 citing articles:

Codon usage bias
Sujatha Thankeswaran Parvathy, V. Udayasuriyan, V. P. Bhadana
Molecular Biology Reports (2021) Vol. 49, Iss. 1, pp. 539-565
Open Access | Times Cited: 295
Synonymous mutations in representative yeast genes are mostly strongly non-neutral
Xukang Shen, Siliang Song, Chuan Li, et al.
Nature (2022) Vol. 606, Iss. 7915, pp. 725-731
Open Access | Times Cited: 226
Non-invasive measurement of mRNA decay reveals translation initiation as the major determinant of mRNA stability
Leon Y Chan, Christopher F Mugler, Stephanie Heinrich, et al.
eLife (2018) Vol. 7
Open Access | Times Cited: 221
A code within the genetic code: codon usage regulates co-translational protein folding
Yi Liu
Cell Communication and Signaling (2020) Vol. 18, Iss. 1
Open Access | Times Cited: 182
Synonymous but Not Silent: The Codon Usage Code for Gene Expression and Protein Folding
Yi Liu, Qian Yang, Fangzhou Zhao
Annual Review of Biochemistry (2021) Vol. 90, Iss. 1, pp. 375-401
Open Access | Times Cited: 134
Translation and mRNA Stability Control
Qiushuang Wu, Ariel Bazzini
Annual Review of Biochemistry (2023) Vol. 92, Iss. 1, pp. 227-245
Open Access | Times Cited: 54
tRNA thiolation optimizes appressorium-mediated infection by enhancing codon-specific translation in Magnaporthe oryzae
Xinrong Zhang, Rong‐Rong He, Yinan Li, et al.
Nucleic Acids Research (2025) Vol. 53, Iss. 1
Open Access | Times Cited: 2
Translation of the downstream ORF from bicistronic mRNAs by human cells: Impact of codon usage and splicing in the upstream ORF
Philippe Paget‐Bailly, Alexandre Helpiquet, Mathilde Decourcelle, et al.
Protein Science (2025) Vol. 34, Iss. 2
Open Access | Times Cited: 2
Codon bias confers stability to humanmRNAs
Fabian Hia, Sheng Fan Yang, Yuichi Shichino, et al.
EMBO Reports (2019) Vol. 20, Iss. 11
Open Access | Times Cited: 134
Deep learning suggests that gene expression is encoded in all parts of a co-evolving interacting gene regulatory structure
Jan Zrimec, Christoph S Börlin, Filip Buric, et al.
Nature Communications (2020) Vol. 11, Iss. 1
Open Access | Times Cited: 131
Circadian Proteomic Analysis Uncovers Mechanisms of Post-Transcriptional Regulation in Metabolic Pathways
Jennifer Hurley, Meaghan S. Jankowski, Hannah De los Santos, et al.
Cell Systems (2018) Vol. 7, Iss. 6, pp. 613-626.e5
Open Access | Times Cited: 101
Codon usage influences fitness through RNA toxicity
Pragya Mittal, James Brindle, J O'Brien Stephen, et al.
Proceedings of the National Academy of Sciences (2018) Vol. 115, Iss. 34, pp. 8639-8644
Open Access | Times Cited: 99
Codon Optimization in the Production of Recombinant Biotherapeutics: Potential Risks and Considerations
Vincent P. Mauro
BioDrugs (2018) Vol. 32, Iss. 1, pp. 69-81
Closed Access | Times Cited: 88
Codon Usage and Splicing Jointly Influence mRNA Localization
Christine Mordstein, Rosina Savisaar, Robert S. Young, et al.
Cell Systems (2020) Vol. 10, Iss. 4, pp. 351-362.e8
Open Access | Times Cited: 81
Improving Protein Quantity and Quality—The Next Level of Plant Molecular Farming
Hai Liu, Michael P. Timko
International Journal of Molecular Sciences (2022) Vol. 23, Iss. 3, pp. 1326-1326
Open Access | Times Cited: 45
Tilapia Lake Virus Vaccine Development: A Review on the Recent Advances
Japhette E. Kembou-Ringert, Dieter Steinhagen, John Readman, et al.
Vaccines (2023) Vol. 11, Iss. 2, pp. 251-251
Open Access | Times Cited: 27
ICOR: improving codon optimization with recurrent neural networks
Rishab Jain, Aditya Jain, Elizabeth Mauro, et al.
BMC Bioinformatics (2023) Vol. 24, Iss. 1
Open Access | Times Cited: 27
Synonymous codon usage regulates translation initiation
Chloe Barrington, Gabriel Galindo, Amanda Koch, et al.
Cell Reports (2023) Vol. 42, Iss. 12, pp. 113413-113413
Open Access | Times Cited: 26
Selection on synonymous sites: the unwanted transcript hypothesis
Sofia Radrizzani, Grzegorz Kudla, Zsuzsanna Izsvák, et al.
Nature Reviews Genetics (2024) Vol. 25, Iss. 6, pp. 431-448
Closed Access | Times Cited: 13
Ancestral aneuploidy and stable chromosomal duplication resulting in differential genome structure and gene expression control in trypanosomatid parasites
João Luís Reis-Cunha, Samuel Alexandre Pimenta Carvalho, Laila Almeida Viana, et al.
Genome Research (2024)
Open Access | Times Cited: 10
Molecular Mechanisms and the Significance of Synonymous Mutations
Peter Oelschlaeger
Biomolecules (2024) Vol. 14, Iss. 1, pp. 132-132
Open Access | Times Cited: 9
Codon-Resolution Analysis Reveals a Direct and Context-Dependent Impact of Individual Synonymous Mutations on mRNA Level
Siyu Chen, Ke Li, Wenqing Cao, et al.
Molecular Biology and Evolution (2017) Vol. 34, Iss. 11, pp. 2944-2958
Open Access | Times Cited: 66
Codon usage biases co-evolve with transcription termination machinery to suppress premature cleavage and polyadenylation
Zhipeng Zhou, Yunkun Dang, Mian Zhou, et al.
eLife (2018) Vol. 7
Open Access | Times Cited: 63
Enhancing heterologous expression in Chlamydomonas reinhardtii by transcript sequence optimization
Iddo Weiner, Shimshi Atar, Shira Schweitzer, et al.
The Plant Journal (2018) Vol. 94, Iss. 1, pp. 22-31
Open Access | Times Cited: 63
eRF1 mediates codon usage effects on mRNA translation efficiency through premature termination at rare codons
Qian Yang, Chien‐Hung Yu, Fangzhou Zhao, et al.
Nucleic Acids Research (2019) Vol. 47, Iss. 17, pp. 9243-9258
Open Access | Times Cited: 60
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