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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Codon usage influences fitness through RNA toxicity
Pragya Mittal, James Brindle, J O'Brien Stephen, et al.
Proceedings of the National Academy of Sciences (2018) Vol. 115, Iss. 34, pp. 8639-8644
Open Access | Times Cited: 99

Showing 1-25 of 99 citing articles:

Total synthesis of Escherichia coli with a recoded genome
Julius Fredens, Kaihang Wang, Daniel de la Torre, et al.
Nature (2019) Vol. 569, Iss. 7757, pp. 514-518
Open Access | Times Cited: 441
Reprogramming the genetic code
Daniel de la Torre, Jason W. Chin
Nature Reviews Genetics (2020) Vol. 22, Iss. 3, pp. 169-184
Closed Access | Times Cited: 221
Synonymous codon substitutions perturb cotranslational protein folding in vivo and impair cell fitness
Ian M. Walsh, Micayla A. Bowman, Iker F. Soto Santarriaga, et al.
Proceedings of the National Academy of Sciences (2020) Vol. 117, Iss. 7, pp. 3528-3534
Open Access | Times Cited: 181
Synonymous but Not Silent: The Codon Usage Code for Gene Expression and Protein Folding
Yi Liu, Qian Yang, Fangzhou Zhao
Annual Review of Biochemistry (2021) Vol. 90, Iss. 1, pp. 375-401
Open Access | Times Cited: 134
Deep learning suggests that gene expression is encoded in all parts of a co-evolving interacting gene regulatory structure
Jan Zrimec, Christoph S Börlin, Filip Buric, et al.
Nature Communications (2020) Vol. 11, Iss. 1
Open Access | Times Cited: 131
Variation and selection on codon usage bias across an entire subphylum
Abigail L. LaBella, Dana A. Opulente, Jacob L. Steenwyk, et al.
PLoS Genetics (2019) Vol. 15, Iss. 7, pp. e1008304-e1008304
Open Access | Times Cited: 92
Codon Usage and Splicing Jointly Influence mRNA Localization
Christine Mordstein, Rosina Savisaar, Robert S. Young, et al.
Cell Systems (2020) Vol. 10, Iss. 4, pp. 351-362.e8
Open Access | Times Cited: 81
Strategies for efficient production of recombinant proteins in Escherichia coli: alleviating the host burden and enhancing protein activity
Zixu Zhang, Fang‐Tong Nong, Yu‐Zhou Wang, et al.
Microbial Cell Factories (2022) Vol. 21, Iss. 1
Open Access | Times Cited: 58
Selection on synonymous sites: the unwanted transcript hypothesis
Sofia Radrizzani, Grzegorz Kudla, Zsuzsanna Izsvák, et al.
Nature Reviews Genetics (2024) Vol. 25, Iss. 6, pp. 431-448
Closed Access | Times Cited: 13
Strategies to overcome the challenges of low or no expression of heterologous proteins in Escherichia coli
Ruizhao Jiang, Shuting Yuan, Yilong Zhou, et al.
Biotechnology Advances (2024) Vol. 75, pp. 108417-108417
Closed Access | Times Cited: 10
The complete chloroplast genome sequence of yellow mustard (Sinapis alba L.) and its phylogenetic relationship to other Brassicaceae species
Xuye Du, Tuo Zeng, Qun Feng, et al.
Gene (2020) Vol. 731, pp. 144340-144340
Closed Access | Times Cited: 70
The Ongoing Quest to Crack the Genetic Code for Protein Production
Thijs Nieuwkoop, Max Finger‐Bou, John van der Oost, et al.
Molecular Cell (2020) Vol. 80, Iss. 2, pp. 193-209
Open Access | Times Cited: 55
Towards an engineering theory of evolution
Simeon D. Castle, Claire Grierson, Thomas E. Gorochowski
Nature Communications (2021) Vol. 12, Iss. 1
Open Access | Times Cited: 52
Proteomics and metabolic burden analysis to understand the impact of recombinant protein production in E. coli
Girish H. Rajacharya, Ashima Sharma, Syed Shams Yazdani
Scientific Reports (2024) Vol. 14, Iss. 1
Open Access | Times Cited: 8
Multi-chassis engineering for heterologous production of microbial natural products
Ke Jing, Yasuo Yoshikuni
Current Opinion in Biotechnology (2019) Vol. 62, pp. 88-97
Open Access | Times Cited: 51
Contemporary Tools for Regulating Gene Expression in Bacteria
Ross Kent, Neil Dixon
Trends in biotechnology (2019) Vol. 38, Iss. 3, pp. 316-333
Open Access | Times Cited: 50
Recombinant protein production associated growth inhibition results mainly from transcription and not from translation
Zhaopeng Li, Ursula Rinas
Microbial Cell Factories (2020) Vol. 19, Iss. 1
Open Access | Times Cited: 47
The bacterial promoter spacer modulates promoter strength and timing by length, TG-motifs and DNA supercoiling sensitivity
Carlo Klein, Marc Teufel, Carl J. Weile, et al.
Scientific Reports (2021) Vol. 11, Iss. 1
Open Access | Times Cited: 39
Codon usage bias and genetic diversity in chloroplast genomes of Elaeagnus species (Myrtiflorae: Elaeagnaceae)
Changle Li, Ling Zhou, Jiangbo Nie, et al.
Physiology and Molecular Biology of Plants (2023) Vol. 29, Iss. 2, pp. 239-251
Closed Access | Times Cited: 13
Protein folding stability and binding interactions through the lens of evolution: a dynamical perspective
Tushar Modi, Paul Campitelli, I. Can Kazan, et al.
Current Opinion in Structural Biology (2020) Vol. 66, pp. 207-215
Open Access | Times Cited: 39
Transcription, mRNA Export, and Immune Evasion Shape the Codon Usage of Viruses
Christine Mordstein, Laura Cano, Atahualpa Castillo-Morales, et al.
Genome Biology and Evolution (2021) Vol. 13, Iss. 9
Open Access | Times Cited: 32
Learning the Regulatory Code of Gene Expression
Jan Zrimec, Filip Buric, Mariia Kokina, et al.
Frontiers in Molecular Biosciences (2021) Vol. 8
Open Access | Times Cited: 29
Heterologous production of cellulose- and starch-degrading hydrolases to expand Saccharomyces cerevisiae substrate utilization: Lessons learnt
Riaan den Haan, Shaunita H. Rose, Rosemary A. Cripwell, et al.
Biotechnology Advances (2021) Vol. 53, pp. 107859-107859
Closed Access | Times Cited: 29
Deep learning-based codon optimization with large-scale synonymous variant datasets enables generalized tunable protein expression
David A. Constant, Jahir M. Gutierrez, Anand V. Sastry, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 11
Fitness and adaptive evolution of a Rhodococcus sp. harboring dioxin-catabolic plasmids
Xu Wang, Changai Fu, Meng Chen, et al.
World Journal of Microbiology and Biotechnology (2025) Vol. 41, Iss. 2
Closed Access
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