OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Variable presence of the inverted repeat and plastome stability inErodium
John C. Blazier, Robert K. Jansen, Jeffrey P. Mower, et al.
Annals of Botany (2016) Vol. 117, Iss. 7, pp. 1209-1220
Open Access | Times Cited: 90

Showing 1-25 of 90 citing articles:

PACVr: plastome assembly coverage visualization in R
Michael Gruenstaeudl, Nils Jenke
BMC Bioinformatics (2020) Vol. 21, Iss. 1
Open Access | Times Cited: 276

Incongruence between gene trees and species trees and phylogenetic signal variation in plastid genes
Deise J.P. Gonçalves, Beryl B. Simpson, Edgardo M. Ortiz, et al.
Molecular Phylogenetics and Evolution (2019) Vol. 138, pp. 219-232
Open Access | Times Cited: 164

Complete chloroplast genomes provide insights into evolution and phylogeny of Zingiber (Zingiberaceae)
Dongzhu Jiang, Xiaodong Cai, Min Gong, et al.
BMC Genomics (2023) Vol. 24, Iss. 1
Open Access | Times Cited: 43

Structural Diversity Among Plastid Genomes of Land Plants
Jeffrey P. Mower, Trisha L. Vickrey
Advances in botanical research (2017), pp. 263-292
Closed Access | Times Cited: 145

Expansion of inverted repeat does not decrease substitution rates in Pelargonium plastid genomes
Mao‐Lun Weng, Tracey A. Ruhlman, Robert K. Jansen
New Phytologist (2016) Vol. 214, Iss. 2, pp. 842-851
Open Access | Times Cited: 110

Plastome Evolution and Phylogeny of Orchidaceae, With 24 New Sequences
Young-Kee Kim, Sangjin Jo, Se-Hwan Cheon, et al.
Frontiers in Plant Science (2020) Vol. 11
Open Access | Times Cited: 106

Recombination‐dependent replication and gene conversion homogenize repeat sequences and diversify plastid genome structure
Tracey A. Ruhlman, Jin Zhang, John C. Blazier, et al.
American Journal of Botany (2017) Vol. 104, Iss. 4, pp. 559-572
Open Access | Times Cited: 96

Lost and Found: Return of the Inverted Repeat in the Legume Clade Defined by Its Absence
In‐Su Choi, Robert K. Jansen, Tracey A. Ruhlman
Genome Biology and Evolution (2019) Vol. 11, Iss. 4, pp. 1321-1333
Open Access | Times Cited: 86

The chloroplast genome evolution of Venus slipper (Paphiopedilum): IR expansion, SSC contraction, and highly rearranged SSC regions
Yanyan Guo, Jia-Xing Yang, Ming-Zhu Bai, et al.
BMC Plant Biology (2021) Vol. 21, Iss. 1
Open Access | Times Cited: 80

A Repertory of Rearrangements and the Loss of an Inverted Repeat Region in Passiflora Chloroplast Genomes
Luiz Augusto Cauz‐Santos, Zirlane Portugal Costa, Caroline Callot, et al.
Genome Biology and Evolution (2020) Vol. 12, Iss. 10, pp. 1841-1857
Open Access | Times Cited: 71

Extreme Reconfiguration of Plastid Genomes in Papaveraceae: Rearrangements, Gene Loss, Pseudogenization, IR Expansion, and Repeats
Jia-Liang Cao, Hongwei Wang, Yanan Cao, et al.
International Journal of Molecular Sciences (2024) Vol. 25, Iss. 4, pp. 2278-2278
Open Access | Times Cited: 8

Divergent copies of the large inverted repeat in the chloroplast genomes of ulvophycean green algae
Monique Turmel, Christian Otis, Claude Lemieux
Scientific Reports (2017) Vol. 7, Iss. 1
Open Access | Times Cited: 76

Plastid Genome Evolution in the Early-Diverging Legume Subfamily Cercidoideae (Fabaceae)
Yinhuan Wang, Susann Wicke, Hong Wang, et al.
Frontiers in Plant Science (2018) Vol. 9
Open Access | Times Cited: 76

Plastomes of Mimosoideae: structural and size variation, sequence divergence, and phylogenetic implication
Yinhuan Wang, Xiao‐Jian Qu, Siyun Chen, et al.
Tree Genetics & Genomes (2017) Vol. 13, Iss. 2
Closed Access | Times Cited: 74

Passifloraplastome sequencing reveals widespread genomic rearrangements
Samar Rabah, Bikash Shrestha, Nahid H. Hajrah, et al.
Journal of Systematics and Evolution (2018) Vol. 57, Iss. 1, pp. 1-14
Open Access | Times Cited: 65

Contrasting Patterns of Nucleotide Substitution Rates Provide Insight into Dynamic Evolution of Plastid and Mitochondrial Genomes of Geranium
Seongjun Park, Tracey A. Ruhlman, Mao-Lun Weng, et al.
Genome Biology and Evolution (2017) Vol. 9, Iss. 6, pp. 1766-1780
Open Access | Times Cited: 63

Highly accelerated rates of genomic rearrangements and nucleotide substitutions in plastid genomes of Passiflora subgenus Decaloba
Bikash Shrestha, Mao-Lun Weng, Edward C. Theriot, et al.
Molecular Phylogenetics and Evolution (2019) Vol. 138, pp. 53-64
Closed Access | Times Cited: 61

Extensive genomic rearrangements mediated by repetitive sequences in plastomes of Medicago and its relatives
Shuang Wu, Jinyuan Chen, Ying Li, et al.
BMC Plant Biology (2021) Vol. 21, Iss. 1
Open Access | Times Cited: 41

Chloroplast genomes of four Carex species: Long repetitive sequences trigger dramatic changes in chloroplast genome structure
Shenjian Xu, Ke Teng, Hui Zhang, et al.
Frontiers in Plant Science (2023) Vol. 14
Open Access | Times Cited: 21

Removal of the large inverted repeat from the plastid genome reveals gene dosage effects and leads to increased genome copy number
Carolin Krämer, Christian R. Boehm, Jinghan Liu, et al.
Nature Plants (2024) Vol. 10, Iss. 6, pp. 923-935
Open Access | Times Cited: 7

Total duplication of the small single copy region in the angiosperm plastome: Rearrangement and inverted repeat instability in Asarum
Brandon T. Sinn, Dylan D. Sedmak, Lawrence M. Kelly, et al.
American Journal of Botany (2018) Vol. 105, Iss. 1, pp. 71-84
Open Access | Times Cited: 54

Plastome-Wide Nucleotide Substitution Rates Reveal Accelerated Rates in Papilionoideae and Correlations with Genome Features Across Legume Subfamilies
Erika N. Schwarz, Tracey A. Ruhlman, Mao-Lun Weng, et al.
Journal of Molecular Evolution (2017) Vol. 84, Iss. 4, pp. 187-203
Closed Access | Times Cited: 52

Comparative Analyses of Chloroplast Genomes Provide Comprehensive Insights into the Adaptive Evolution of Paphiopedilum (Orchidaceae)
Hengzhao Liu, Hang Ye, Naiyu Zhang, et al.
Horticulturae (2022) Vol. 8, Iss. 5, pp. 391-391
Open Access | Times Cited: 25

Comparative Analysis of Chloroplast Pan-Genomes and Transcriptomics Reveals Cold Adaptation in Medicago sativa
Tianxiang Zhang, Xiuhua Chen, Yan Wei, et al.
International Journal of Molecular Sciences (2024) Vol. 25, Iss. 3, pp. 1776-1776
Open Access | Times Cited: 5

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