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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

DeepCPP: a deep neural network based on nucleotide bias information and minimum distribution similarity feature selection for RNA coding potential prediction
Yu Zhang, Cangzhi Jia, Melissa J. Fullwood, et al.
Briefings in Bioinformatics (2020) Vol. 22, Iss. 2, pp. 2073-2084
Closed Access | Times Cited: 57

Showing 1-25 of 57 citing articles:

Peptidomics
Roland Hellinger, Arnar Sigurdsson, Wenxin Wu, et al.
Nature Reviews Methods Primers (2023) Vol. 3, Iss. 1
Open Access | Times Cited: 59
Revisiting sORFs: overcoming challenges to identify and characterize functional microproteins
Dörte Schlesinger, Simon J. Elsässer
FEBS Journal (2021) Vol. 289, Iss. 1, pp. 53-74
Open Access | Times Cited: 89
Short open reading frames (sORFs) and microproteins: an update on their identification and validation measures
Alyssa Zi-Xin Leong, Pey Yee Lee, M. Aiman Mohtar, et al.
Journal of Biomedical Science (2022) Vol. 29, Iss. 1
Open Access | Times Cited: 50
A task-specific encoding algorithm for RNAs and RNA-associated interactions based on convolutional autoencoder
Yunxia Wang, Ziqi Pan, Minjie Mou, et al.
Nucleic Acids Research (2023) Vol. 51, Iss. 21, pp. e110-e110
Open Access | Times Cited: 34
No country for old methods: New tools for studying microproteins
Fabiola Valdivia-Francia, Ataman Sendoel
iScience (2024) Vol. 27, Iss. 2, pp. 108972-108972
Open Access | Times Cited: 12
Current understanding of functional peptides encoded by lncRNA in cancer
Hua Tian, Lu Tang, Zihan Yang, et al.
Cancer Cell International (2024) Vol. 24, Iss. 1
Open Access | Times Cited: 11
Small Open Reading Frame-Encoded Micro-Peptides: An Emerging Protein World
Xiao‐Ping Dong, Kun Zhang, Chengfeng Xun, et al.
International Journal of Molecular Sciences (2023) Vol. 24, Iss. 13, pp. 10562-10562
Open Access | Times Cited: 19
Feature extraction approaches for biological sequences: a comparative study of mathematical features
Robson Parmezan Bonidia, Lucas Dias Hiera Sampaio, Douglas Silva Domingues, et al.
Briefings in Bioinformatics (2021) Vol. 22, Iss. 5
Open Access | Times Cited: 39
Advances and perspectives in discovery and functional analysis of small secreted proteins in plants
Xiaoli Hu, Haiwei Lu, Md Mahmudul Hassan, et al.
Horticulture Research (2021) Vol. 8, Iss. 1
Open Access | Times Cited: 39
csORF-finder: an effective ensemble learning framework for accurate identification of multi-species coding short open reading frames
Meng Zhang, Jian Zhao, Chen Li, et al.
Briefings in Bioinformatics (2022) Vol. 23, Iss. 6
Open Access | Times Cited: 19
Unveiling the secrets of non-coding RNA-encoded peptides in plants: A comprehensive review of mining methods and research progress
Zhengjie Wang, Qi Cui, Chenglin Su, et al.
International Journal of Biological Macromolecules (2023) Vol. 242, pp. 124952-124952
Closed Access | Times Cited: 13
An introduction to non-coding RNAs
Charan PSVV, Ann Mary Joseph, Praveen Ebenezer, et al.
Progress in molecular biology and translational science (2025)
Closed Access
SORFPP: Enhancing rich sequence-driven information to identify SEPs based on fused framework on validation datasets
Hongqi Feng, Q. Nie, Sen Yang
PLoS ONE (2025) Vol. 20, Iss. 4, pp. e0320314-e0320314
Open Access
A survey of computational methods and databases for lncRNA-miRNA interaction prediction
Nan Sheng, Lan Huang, Ling Gao, et al.
IEEE/ACM Transactions on Computational Biology and Bioinformatics (2023) Vol. 20, Iss. 5, pp. 2810-2826
Open Access | Times Cited: 10
No country for old methods: New tools for studying microproteins
Fabiola Valdivia-Francia, Ataman Sendoel
iScience (2024) Vol. 27, Iss. 8, pp. 110478-110478
Open Access | Times Cited: 3
Deep learning based DNA:RNA triplex forming potential prediction
Yu Zhang, Yahui Long, Chee Keong Kwoh
BMC Bioinformatics (2020) Vol. 21, Iss. 1
Open Access | Times Cited: 26
Predicting the interaction biomolecule types for lncRNA: an ensemble deep learning approach
Yu Zhang, Cangzhi Jia, Chee Keong Kwoh
Briefings in Bioinformatics (2020) Vol. 22, Iss. 4
Closed Access | Times Cited: 24
Ensemble Deep Learning Based on Multi-level Information Enhancement and Greedy Fuzzy Decision for Plant miRNA–lncRNA Interaction Prediction
Qiang Kang, Jun Meng, Wenhao Shi, et al.
Interdisciplinary Sciences Computational Life Sciences (2021) Vol. 13, Iss. 4, pp. 603-614
Closed Access | Times Cited: 22
sORFPred: A Method Based on Comprehensive Features and Ensemble Learning to Predict the sORFs in Plant LncRNAs
Ziwei Chen, Jun Meng, Siyuan Zhao, et al.
Interdisciplinary Sciences Computational Life Sciences (2023) Vol. 15, Iss. 2, pp. 189-201
Closed Access | Times Cited: 8
Heterogeneous graph attention networks for drug virus association prediction
Yahui Long, Yu Zhang, Min Wu, et al.
Methods (2021) Vol. 198, pp. 11-18
Open Access | Times Cited: 17
ncRNA Coding Potential Prediction Using BiLSTM and Transformer Encoder-Based Model
Jingpu Zhang, Hao Lu, Jiang Ying, et al.
Journal of Chemical Information and Modeling (2024) Vol. 64, Iss. 16, pp. 6712-6722
Closed Access | Times Cited: 2
Prediction of protein-coding small ORFs in multi-species using integrated sequence-derived features and the random forest model
Jiafeng Yu, Wenwen Jiang, Sen-Bin Zhu, et al.
Methods (2023) Vol. 210, pp. 10-19
Closed Access | Times Cited: 6
ABLNCPP: Attention Mechanism-Based Bidirectional Long Short-Term Memory for Noncoding RNA Coding Potential Prediction
Lei Deng, Jiang Ying, Xiaowen Hu, et al.
Journal of Chemical Information and Modeling (2023) Vol. 63, Iss. 12, pp. 3955-3966
Closed Access | Times Cited: 6
In-depth characterization and identification of translatable lncRNAs
Meng Zhang, Jian Zhao, Jing Wu, et al.
Computers in Biology and Medicine (2023) Vol. 164, pp. 107243-107243
Closed Access | Times Cited: 6
A large-scale benchmark study of tools for the classification of protein-coding and non-coding RNAs
Dalwinder Singh, Joy Roy
Nucleic Acids Research (2022) Vol. 50, Iss. 21, pp. 12094-12111
Open Access | Times Cited: 9
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