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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

On the influence of several factors on pathway enrichment analysis
Sarah Mubeen, Alpha Tom Kodamullil, Martin Hofmann‐Apitius, et al.
Briefings in Bioinformatics (2022) Vol. 23, Iss. 3
Open Access | Times Cited: 34

Showing 1-25 of 34 citing articles:

Comprehensive investigation of pathway enrichment methods for functional interpretation of LC–MS global metabolomics data
Yao Lü, Zhiqiang Pang, Jianguo Xia
Briefings in Bioinformatics (2022) Vol. 24, Iss. 1
Open Access | Times Cited: 91
Nine quick tips for pathway enrichment analysis
Davide Chicco, Giuseppe Agapito
PLoS Computational Biology (2022) Vol. 18, Iss. 8, pp. e1010348-e1010348
Open Access | Times Cited: 44
Interpreting omics data with pathway enrichment analysis
Kangmei Zhao, Seung Y. Rhee
Trends in Genetics (2023) Vol. 39, Iss. 4, pp. 308-319
Open Access | Times Cited: 38
From vision toward best practices: Evaluating in vitro transcriptomic points of departure for application in risk assessment using a uniform workflow
Anthony Reardon, Reza Farmahin, Andrew Williams, et al.
Frontiers in Toxicology (2023) Vol. 5
Open Access | Times Cited: 36
Generalized reporter score-based enrichment analysis for omics data
Peng Chen, Qiong Chen, Shangjin Tan, et al.
Briefings in Bioinformatics (2024) Vol. 25, Iss. 3
Open Access | Times Cited: 15
PathIntegrate: Multivariate modelling approaches for pathway-based multi-omics data integration
Cecilia Wieder, Juliette Cooke, Clément Frainay, et al.
PLoS Computational Biology (2024) Vol. 20, Iss. 3, pp. e1011814-e1011814
Open Access | Times Cited: 9
Identification of gene expression signature for drought stress response in barley (Hordeum vulgare L.) using machine learning approach
Bahman Panahi, Saber Golkari
Current Plant Biology (2024) Vol. 39, pp. 100370-100370
Open Access | Times Cited: 8
Ten quick tips for computational analysis of medical images
Davide Chicco, Rakesh Shiradkar
PLoS Computational Biology (2023) Vol. 19, Iss. 1, pp. e1010778-e1010778
Open Access | Times Cited: 14
A brief survey of tools for genomic regions enrichment analysis
Davide Chicco, Giuseppe Jurman
Frontiers in Bioinformatics (2022) Vol. 2
Open Access | Times Cited: 20
Current approaches and outstanding challenges of functional annotation of metabolites: a comprehensive review
Quang‐Huy Nguyen, Ha Nam Nguyen, Edwin C. Oh, et al.
Briefings in Bioinformatics (2024) Vol. 25, Iss. 6
Open Access | Times Cited: 4
Mitochondrial Dysfunction: Unraveling the Elusive Biology Behind Anti-TNF Response During Ulcerative Colitis
Dimitrios Kioroglou, Ainize Peña‐Cearra, A M Corraliza, et al.
Inflammatory Bowel Diseases (2025)
Closed Access
ASS1 is a hub gene and possible therapeutic target for regulating metabolic dysfunction-associated steatotic liver disease modulated by a carbohydrate-restricted diet
Shaojun Chen, Yanhua Bi, Lihua Zhang
Molecular Diversity (2025)
Closed Access
Shatavari supplementation in postmenopausal women alters the skeletal muscle proteome and pathways involved in training adaptation
Mary F. O’Leary, Sarah R. Jackman, Joanna L. Bowtell
European Journal of Nutrition (2024) Vol. 63, Iss. 3, pp. 869-879
Open Access | Times Cited: 3
PESSA: A web tool for pathway enrichment score-based survival analysis in cancer
Hong Yang, Y F Shi, Anqi Lin, et al.
PLoS Computational Biology (2024) Vol. 20, Iss. 5, pp. e1012024-e1012024
Open Access | Times Cited: 3
Plasma proteins and coronary atherosclerosis: A Mendelian randomization study
Henan Pan, Zongkai Wu, Yaran Gao, et al.
Medicine (2025) Vol. 104, Iss. 8, pp. e41549-e41549
Open Access
A tiered testing strategy based on in vitro phenotypic and transcriptomic data for selecting representative petroleum UVCBs for toxicity evaluation in vivo
Han‐Hsuan D. Tsai, John S. House, Fred A. Wright, et al.
Toxicological Sciences (2023) Vol. 193, Iss. 2, pp. 219-233
Closed Access | Times Cited: 5
PathIntegrate: Multivariate modelling approaches for pathway-based multi-omics data integration
Cecilia Wieder, Juliette Cooke, Clément Frainay, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 1
Robustness evaluations of pathway activity inference methods on gene expression data
Tay Xin Hui, Shahreen Kasim, Izzatdin Abdul Aziz, et al.
BMC Bioinformatics (2024) Vol. 25, Iss. 1
Open Access | Times Cited: 1
Assessment of Gene Set Enrichment Analysis using curated RNA-seq-based benchmarks
Julián Candia, Luigi Ferrucci
PLoS ONE (2024) Vol. 19, Iss. 5, pp. e0302696-e0302696
Open Access | Times Cited: 1
FORWARD: A Learning Framework for Logical Network Perturbations to Prioritize Targets for Drug Development
Saptarshi Sinha, Ella McLaren, Madhubanti Mullick, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 1
Generalized Reporter Score-based Enrichment Analysis for Omics Data
Peng Chen, Qiong Chen, Shangjin Tan, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 3
On the correspondence between the transcriptomic response of a compound and its effects on its targets
Chloe Engler Hart, Daniel Ence, David Healey, et al.
BMC Bioinformatics (2023) Vol. 24, Iss. 1
Open Access | Times Cited: 2
Prediction and pathogenesis of gallstone disease based on clinical metabolomics
Xiang Li, Zhengtao Liu, Xiaodan Yin, et al.
Research Square (Research Square) (2024)
Open Access
Synaptic proteome diversity is primarily driven by gene regulation of glutamate receptors and their regulatory proteins
Rita Reig‐Viader, Diego Del Castillo-Berges, Albert Burgas-Pau, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access
Analysis and Review of Downregulated Actin Cytoskeletal Proteins in Non-Small Cell Lung Cancer
Hala M. Abdel Mageed, Praveen Sahu, Raji Sundararajan
Journal of Biosciences and Medicines (2024) Vol. 12, Iss. 04, pp. 89-115
Open Access
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