OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Prediction of gene co-expression from chromatin contacts with graph attention network
Ke Zhang, Chenxi Wang, Liping Sun, et al.
Bioinformatics (2022) Vol. 38, Iss. 19, pp. 4457-4465
Open Access | Times Cited: 10

Showing 10 citing articles:

Big data and deep learning for RNA biology
Hyeonseo Hwang, Hyeonseong Jeon, Nagyeong Yeo, et al.
Experimental & Molecular Medicine (2024) Vol. 56, Iss. 6, pp. 1293-1321
Open Access | Times Cited: 11

scHiGex: predicting single-cell gene expression based on single-cell Hi-C data
Bishal Shrestha, A. Siciliano, Hao Zhu, et al.
NAR Genomics and Bioinformatics (2025) Vol. 7, Iss. 1
Open Access

UV-induced reorganization of 3D genome mediates DNA damage response
Veysel Oğulcan Kaya, Ogün Adebalı
Nature Communications (2025) Vol. 16, Iss. 1
Open Access

UV-induced reorganization of 3D genome mediates DNA damage response
Veysel Oğulcan Kaya, Ogün Adebalı
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 1

Proximogram—A multi-omics network-based framework to capture tissue heterogeneity integrating single-cell omics and spatial profiling
Santhoshi Krishnan, Sunjong Ji, Ahmed M. Elhossiny, et al.
Computers in Biology and Medicine (2024) Vol. 182, pp. 109082-109082
Open Access | Times Cited: 1

WGCNA and Machine Learning-based Integrative Bioinformatics Analysis for Identifying Key Genes of Colorectal Cancer
Md. Al Mehedi Hasan, Md. Maniruzzaman, Jungpil Shin
IEEE Access (2024) Vol. 12, pp. 144350-144363
Open Access | Times Cited: 1

Graph Neural Networks for Z-DNA prediction in Genomes
Artem Voytetskiy, Alan Herbert, Maria Poptsova
2021 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) (2022), pp. 3173-3178
Open Access | Times Cited: 3

Optimized Python library for reconstruction of ensemble-based gene co-expression networks using multi-GPU
Aurelio López López, Francisco Gómez-Vela, María del Saz-Navarro, et al.
The Journal of Supercomputing (2024) Vol. 80, Iss. 12, pp. 18142-18176
Open Access

Graph Neural Networks for Z-DNA prediction in Genomes
Artem Voytetskiy, Alan Herbert, Maria Poptsova
bioRxiv (Cold Spring Harbor Laboratory) (2022)
Closed Access

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