OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

CABS-dock standalone: a toolbox for flexible protein–peptide docking
Mateusz Kurciński, Maciej Paweł Ciemny, Tymoteusz Oleniecki, et al.
Bioinformatics (2019) Vol. 35, Iss. 20, pp. 4170-4172
Open Access | Times Cited: 79

Showing 1-25 of 79 citing articles:

Integrative Modelling of Biomolecular Complexes
Panagiotis I. Koukos, Alexandre M. J. J. Bonvin
Journal of Molecular Biology (2019) Vol. 432, Iss. 9, pp. 2861-2881
Open Access | Times Cited: 89

Antioxidant, pancreatic lipase, and α‐amylase inhibitory properties of oat bran hydrolyzed proteins and peptides
Ramak Esfandi, Issaka Seidu, William G. Willmore, et al.
Journal of Food Biochemistry (2021) Vol. 46, Iss. 4
Open Access | Times Cited: 56

Open-Source Machine Learning in Computational Chemistry
Alexander Hagg, Karl N. Kirschner
Journal of Chemical Information and Modeling (2023) Vol. 63, Iss. 15, pp. 4505-4532
Open Access | Times Cited: 28

Computational prediction of disordered binding regions
Sushmita Basu, Daisuke Kihara, Lukasz Kurgan
Computational and Structural Biotechnology Journal (2023) Vol. 21, pp. 1487-1497
Open Access | Times Cited: 25

The role and future prospects of artificial intelligence algorithms in peptide drug development
Zhiheng Chen, Ruoxi Wang, Junqi Guo, et al.
Biomedicine & Pharmacotherapy (2024) Vol. 175, pp. 116709-116709
Open Access | Times Cited: 15

Flexible docking of peptides to proteins using CABS‐dock
Mateusz Kurciński, Aleksandra E. Badaczewska-Dawid, Michał Koliński, et al.
Protein Science (2019) Vol. 29, Iss. 1, pp. 211-222
Open Access | Times Cited: 70

Targeting Tumors Using Peptides
Pablo Scodeller, Eliana K. Asciutto
Molecules (2020) Vol. 25, Iss. 4, pp. 808-808
Open Access | Times Cited: 64

Computational reconstruction of atomistic protein structures from coarse-grained models
Aleksandra E. Badaczewska-Dawid, Andrzej Koliński, Sebastian Kmiecik
Computational and Structural Biotechnology Journal (2019) Vol. 18, pp. 162-176
Open Access | Times Cited: 50

Modeling of Disordered Protein Structures Using Monte Carlo Simulations and Knowledge-Based Statistical Force Fields
Maciej Paweł Ciemny, Aleksandra E. Badaczewska-Dawid, Monika Pikuzinska, et al.
International Journal of Molecular Sciences (2019) Vol. 20, Iss. 3, pp. 606-606
Open Access | Times Cited: 47

Modelling peptide–protein complexes: docking, simulations and machine learning
Arup Mondal, Liwei Chang, Alberto Pérez
QRB Discovery (2022) Vol. 3
Open Access | Times Cited: 25

Design of Cyclic Peptides Targeting Protein–Protein Interactions Using AlphaFold
Takatsugu Kosugi, Masahito Ohue
International Journal of Molecular Sciences (2023) Vol. 24, Iss. 17, pp. 13257-13257
Open Access | Times Cited: 15

Invited review: Camel milk–derived bioactive peptides and diabetes—Molecular view and perspectives
Mohammed Akli Ayoub, Pei-Gee Yap, Priti Mudgil, et al.
Journal of Dairy Science (2023) Vol. 107, Iss. 2, pp. 649-668
Open Access | Times Cited: 14

The identification of a SARs-CoV2 S2 protein derived peptide with super-antigen-like stimulatory properties on T-cells
Thai Hien Tu, Fatima Ezzahra Bennani, Nasser Masroori, et al.
Communications Biology (2025) Vol. 8, Iss. 1
Open Access

Two decades of advances in sequence-based prediction of MoRFs, disorder-to-order transitioning binding regions
Jiangning Song, Lukasz Kurgan
Expert Review of Proteomics (2025)
Closed Access

Repression of apelin Furin cleavage sites provides antimetastatic strategy in colorectal cancer
Béatrice Demoures, Fabienne Soulet, Jean Descarpentrie, et al.
EMBO Molecular Medicine (2025)
Open Access

Snake Venom-Inspired Novel Peptides Protect Caenorhabditis elegans against Paraquat-Induced Parkinson’s Pathology
Dev Madhubala, Rosy Mahato, Kangkon Saikia, et al.
ACS Chemical Neuroscience (2025)
Closed Access

Molecular Modelling in Bioactive Peptide Discovery and Characterisation
Clement Agoni, Raúl Fernández-Díaz, Patrick Brendan Timmons, et al.
Biomolecules (2025) Vol. 15, Iss. 4, pp. 524-524
Open Access

Mechanistic insights into Alpha-Synuclein binding to P2RX7: A molecular dynamic and docking study
Mukesh Kumar, Kanchan Singh, J G Joshi, et al.
PLoS ONE (2025) Vol. 20, Iss. 5, pp. e0319098-e0319098
Open Access

Prediction of virus–host interactions and identification of hot spot residues of DENV-2 and SH3 domain interactions
Mithila Banik, Keshav Raj Paudel, Rajib Majumder, et al.
Archives of Microbiology (2024) Vol. 206, Iss. 4
Open Access | Times Cited: 3

Novel Methodology for the Design of Personalized Cancer Vaccine Targeting Neoantigens: Application to Pancreatic Ductal Adenocarcinoma
Kush Savsani, Sivanesan Dakshanamurthy
Diseases (2024) Vol. 12, Iss. 7, pp. 149-149
Open Access | Times Cited: 3

Multi-level analysis of intrinsically disordered protein docking methods
Jacob Verburgt, Zicong Zhang, Daisuke Kihara
Methods (2022) Vol. 204, pp. 55-63
Open Access | Times Cited: 13

Protocols for Fast Simulations of Protein Structure Flexibility Using CABS-Flex and SURPASS
Aleksandra E. Badaczewska-Dawid, Andrzej Koliński, Sebastian Kmiecik
Methods in molecular biology (2020), pp. 337-353
Closed Access | Times Cited: 19

Molecular Docking of Intrinsically Disordered Proteins: Challenges and Strategies
Keyur N. Patel, Dhruvil Chavda, Moutusi Manna
Methods in molecular biology (2024), pp. 165-201
Closed Access | Times Cited: 2

Discovery of Highly Bioactive Peptides through Hierarchical Structural Information and Molecular Dynamics Simulations
Shu Li, Lü Peng, Liuqing Chen, et al.
Journal of Chemical Information and Modeling (2024)
Closed Access | Times Cited: 2

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