OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Stochastic Gain and Loss of Novel Transcribed Open Reading Frames in the Human Lineage
Daniel P. Dowling, Jonathan F Schmitz, Erich Bornberg‐Bauer
Genome Biology and Evolution (2020) Vol. 12, Iss. 11, pp. 2183-2195
Open Access | Times Cited: 31

Showing 1-25 of 31 citing articles:

Evolution and implications of de novo genes in humans
Luuk A. Broeils, Jorge Ruiz‐Orera, ‎Berend Snel, et al.
Nature Ecology & Evolution (2023) Vol. 7, Iss. 6, pp. 804-815
Closed Access | Times Cited: 44

Structure and function of naturally evolved de novo proteins
Erich Bornberg‐Bauer, Klára Hlouchová, Andreas Lange
Current Opinion in Structural Biology (2021) Vol. 68, pp. 175-183
Closed Access | Times Cited: 68

De novo birth of functional microproteins in the human lineage
Nikolaos Vakirlis, Zoe Vance, Kate M. Duggan, et al.
Cell Reports (2022) Vol. 41, Iss. 12, pp. 111808-111808
Open Access | Times Cited: 65

Experimental characterization of de novo proteins and their unevolved random-sequence counterparts
Brennen Heames, Filip Buchel, Margaux Aubel, et al.
Nature Ecology & Evolution (2023) Vol. 7, Iss. 4, pp. 570-580
Open Access | Times Cited: 30

Population genomics reveals mechanisms and dynamics of de novo expressed open reading frame emergence inDrosophila melanogaster
Anna Grandchamp, Lucas Kühl, Marie Kristin Lebherz, et al.
Genome Research (2023) Vol. 33, Iss. 6, pp. 872-890
Open Access | Times Cited: 15

Assessing structure and disorder prediction tools for de novo emerged proteins in the age of machine learning
Margaux Aubel, Lars A. Eicholt, Erich Bornberg‐Bauer
F1000Research (2023) Vol. 12, pp. 347-347
Open Access | Times Cited: 12

Do “Newly Born” orphan proteins resemble “Never Born” proteins? A study using three deep learning algorithms
Jing Liu, Rongqing Yuan, Wei Shao, et al.
Proteins Structure Function and Bioinformatics (2023) Vol. 91, Iss. 8, pp. 1097-1115
Open Access | Times Cited: 12

The Rapid Evolution of De Novo Proteins in Structure and Complex
Jianhai Chen, Qingrong Li, Shengqian Xia, et al.
Genome Biology and Evolution (2024) Vol. 16, Iss. 6
Open Access | Times Cited: 3

New Genomic Signals Underlying the Emergence of Human Proto-Genes
Anna Grandchamp, Katrin Berk, Elias Dohmen, et al.
Genes (2022) Vol. 13, Iss. 2, pp. 284-284
Open Access | Times Cited: 15

Heterologous expression of naturally evolved putative de novo proteins with chaperones
Lars A. Eicholt, Margaux Aubel, Katrin Berk, et al.
Protein Science (2022) Vol. 31, Iss. 8
Open Access | Times Cited: 14

Thousands of Pristionchus pacificus orphan genes were integrated into developmental networks that respond to diverse environmental microbiota
Marina Athanasouli, Nermin Akduman, Waltraud Röseler, et al.
PLoS Genetics (2023) Vol. 19, Iss. 7, pp. e1010832-e1010832
Open Access | Times Cited: 9

A sequence‐based foldability score combined with AlphaFold2 predictions to disentangle the protein order/disorder continuum
Apolline Bruley, Tristan Bitard‐Feildel, Isabelle Callebaut, et al.
Proteins Structure Function and Bioinformatics (2022) Vol. 91, Iss. 4, pp. 466-484
Open Access | Times Cited: 14

High-throughput Selection of Human de novo-emerged sORFs with High Folding Potential
Margaux Aubel, Filip Buchel, Brennen Heames, et al.
Genome Biology and Evolution (2024) Vol. 16, Iss. 4
Open Access | Times Cited: 2

Open reading frame dominance indicates protein‐coding potential of RNAs
Yusuke Suenaga, Mamoru Kato, Momoko Nagai, et al.
EMBO Reports (2022) Vol. 23, Iss. 6
Open Access | Times Cited: 9

High-throughput selection of humande novo-emerged sORFs with high folding potential
Margaux Aubel, Filip Buchel, Brennen Heames, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 1

Origin of functional de novo genes in humans from “hopeful monsters”
Xiaoge Liu, Chunfu Xiao, Xinwei Xu, et al.
Wiley Interdisciplinary Reviews - RNA (2024) Vol. 15, Iss. 2
Closed Access | Times Cited: 1

Modeling Length Changes in De Novo Open Reading Frames during Neutral Evolution
Marie Kristin Lebherz, Bharat Ravi Iyengar, Erich Bornberg‐Bauer
Genome Biology and Evolution (2024) Vol. 16, Iss. 7
Open Access | Times Cited: 1

Experimental characterisation of de novo proteins and their unevolved random-sequence counterparts
Brennen Heames, Filip Buchel, Margaux Aubel, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2022)
Open Access | Times Cited: 7

The Phenomenon of Evolutionary “De Novo Generation” of Genes
Р. О. Черезов, Yu. E. Vorontsova, О. Б. Симонова
Russian Journal of Developmental Biology (2021) Vol. 52, Iss. 6, pp. 390-400
Closed Access | Times Cited: 6

Population genomics reveals mechanisms and dynamics ofde novoproto-gene emergence inDrosophila melanogaster
Anna Grandchamp, Lucas Kühl, Marie Kristin Lebherz, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2022)
Open Access | Times Cited: 3

De novoORFs are more likely to shrink than to elongate during neutral evolution
Marie Kristin Lebherz, Bharat Ravi Iyengar, Erich Bornberg‐Bauer
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access

A pan-tissue, pan-disease compendium of human orphan genes
Urminder Singh, Jeffrey Haltom, Joseph W. Guarnieri, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access

The lawc gene emerged de novo from conserved genomic elements and acquired a broad expression pattern in Drosophila
Р. О. Черезов, Yu. E. Vorontsova, Е. Е. Куваева, et al.
Journal of genetics and genomics/Journal of Genetics and Genomics (2024)
Closed Access

New genomic signals underlying the emergence of human proto-genes
Anna Grandchamp, Katrin Berk, Elias Dohmen, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2022)
Open Access | Times Cited: 2

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