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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

FlyBase: updates to theDrosophila melanogasterknowledge base
Aoife Larkin, Steven J Marygold, Giulia Antonazzo, et al.
Nucleic Acids Research (2020) Vol. 49, Iss. D1, pp. D899-D907
Open Access | Times Cited: 424

Showing 1-25 of 424 citing articles:

Fly Cell Atlas: A single-nucleus transcriptomic atlas of the adult fruit fly
Hongjie Li, Jasper Janssens, Maxime De Waegeneer, et al.
Science (2022) Vol. 375, Iss. 6584
Open Access | Times Cited: 569
FlyBase: a guided tour of highlighted features
L. Sian Gramates, Julie Agapite, Helen Attrill, et al.
Genetics (2022) Vol. 220, Iss. 4
Open Access | Times Cited: 467
ReMap 2022: a database of Human, Mouse, Drosophila and Arabidopsis regulatory regions from an integrative analysis of DNA-binding sequencing experiments
Fayrouz Hammal, Pierre de Langen, Aurélie Bergon, et al.
Nucleic Acids Research (2021) Vol. 50, Iss. D1, pp. D316-D325
Open Access | Times Cited: 302
Ensembl Genomes 2022: an expanding genome resource for non-vertebrates
Andrew Yates, James E. Allen, Ridwan Amode, et al.
Nucleic Acids Research (2021) Vol. 50, Iss. D1, pp. D996-D1003
Open Access | Times Cited: 277
The Human Disease Ontology 2022 update
Lynn M. Schriml, James B. Munro, Mike Schor, et al.
Nucleic Acids Research (2021) Vol. 50, Iss. D1, pp. D1255-D1261
Open Access | Times Cited: 194
FlyBase: updates to the Drosophila genes and genomes database
Arzu Öztürk-Çolak, Steven J Marygold, Giulia Antonazzo, et al.
Genetics (2024) Vol. 227, Iss. 1
Open Access | Times Cited: 141
InsectBase 2.0: a comprehensive gene resource for insects
Mei Yang, Jing Dong, Shenyang Tang, et al.
Nucleic Acids Research (2021) Vol. 50, Iss. D1, pp. D1040-D1045
Open Access | Times Cited: 129
Transcriptional coupling of distant regulatory genes in living embryos
Michal Levo, João Raimundo, Xinyang Bing, et al.
Nature (2022) Vol. 605, Iss. 7911, pp. 754-760
Open Access | Times Cited: 129
The Arabidopsis Information Resource in 2024
Leonore Reiser, Erica Bakker, Sabarinath Subramaniam, et al.
Genetics (2024) Vol. 227, Iss. 1
Open Access | Times Cited: 80
Enhancer–promoter interactions become more instructive in the transition from cell-fate specification to tissue differentiation
Tim Pollex, Adam Rabinowitz, Maria Cristina Gambetta, et al.
Nature Genetics (2024) Vol. 56, Iss. 4, pp. 686-696
Open Access | Times Cited: 30
Updates to the Alliance of Genome Resources central infrastructure
Suzi Aleksander, Anna V. Anagnostopoulos, Giulia Antonazzo, et al.
Genetics (2024) Vol. 227, Iss. 1
Open Access | Times Cited: 21
A simple guide to de novo transcriptome assembly and annotation
Venket Raghavan, Louis Kraft, Fantin Mesny, et al.
Briefings in Bioinformatics (2021) Vol. 23, Iss. 2
Open Access | Times Cited: 101
Fission stories: using PomBase to understand Schizosaccharomyces pombe biology
Midori A. Harris, Kim Rutherford, Jacqueline Hayles, et al.
Genetics (2021) Vol. 220, Iss. 4
Open Access | Times Cited: 90
NovoSpaRc: flexible spatial reconstruction of single-cell gene expression with optimal transport
Noa Moriel, Enes Senel, Nir Friedman, et al.
Nature Protocols (2021) Vol. 16, Iss. 9, pp. 4177-4200
Open Access | Times Cited: 85
Genome-scale metabolic network reconstruction of model animals as a platform for translational research
Hao Wang, Jonathan L. Robinson, Pınar Kocabaş, et al.
Proceedings of the National Academy of Sciences (2021) Vol. 118, Iss. 30
Open Access | Times Cited: 80
FlyAtlas 2 in 2022: enhancements to the Drosophila melanogaster expression atlas
Sue Ann Krause, Gayle Overend, Julian A. T. Dow, et al.
Nucleic Acids Research (2021) Vol. 50, Iss. D1, pp. D1010-D1015
Open Access | Times Cited: 68
Mixing genome annotation methods in a comparative analysis inflates the apparent number of lineage-specific genes
Caroline M. Weisman, Andrew W. Murray, Sean R. Eddy
Current Biology (2022) Vol. 32, Iss. 12, pp. 2632-2639.e2
Open Access | Times Cited: 65
An expanded toolkit for Drosophila gene tagging using synthesized homology donor constructs for CRISPR-mediated homologous recombination
Oguz Kanca, Jonathan Zirin, Yanhui Hu, et al.
eLife (2022) Vol. 11
Open Access | Times Cited: 63
Fly Cell Atlas: a single-cell transcriptomic atlas of the adult fruit fly
Hongjie Li, Jasper Janssens, Maxime De Waegeneer, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2021)
Open Access | Times Cited: 61
The Drosophila ZAD zinc finger protein Kipferl guides Rhino to piRNA clusters
Lisa Baumgartner, Dominik Handler, Sebastian Platzer, et al.
eLife (2022) Vol. 11
Open Access | Times Cited: 47
Integrating non-mammalian model organisms in the diagnosis of rare genetic diseases in humans
Shinya Yamamoto, Oguz Kanca, Michael F. Wangler, et al.
Nature Reviews Genetics (2023) Vol. 25, Iss. 1, pp. 46-60
Closed Access | Times Cited: 42
Sites of transcription initiation drive mRNA isoform selection
Carlos Alfonso-Gonzalez, Ivano Legnini, Sarah Holec, et al.
Cell (2023) Vol. 186, Iss. 11, pp. 2438-2455.e22
Open Access | Times Cited: 41
A global timing mechanism regulates cell-type-specific wiring programmes
Saumya Jain, Ying Lin, Yerbol Z. Kurmangaliyev, et al.
Nature (2022) Vol. 603, Iss. 7899, pp. 112-118
Open Access | Times Cited: 40
Virtual Fly Brain—An interactive atlas of the Drosophila nervous system
Robert Court, Marta Costa, Clare Pilgrim, et al.
Frontiers in Physiology (2023) Vol. 14
Open Access | Times Cited: 40
LitSumm: large language models for literature summarization of noncoding RNAs
Andrew Green, Carlos Eduardo Ribas, Nancy Ontiveros‐Palacios, et al.
Database (2025) Vol. 2025
Open Access | Times Cited: 1
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