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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

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Showing 1-25 of 1266 citing articles:

UniProt: the Universal Protein Knowledgebase in 2023
Alex Bateman, María Martin, Sandra Orchard, et al.
Nucleic Acids Research (2022) Vol. 51, Iss. D1, pp. D523-D531
Open Access | Times Cited: 4278
Protein complex prediction with AlphaFold-Multimer
Richard Evans, M. E. O’Neill, Alexander Pritzel, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2021)
Open Access | Times Cited: 2942
The carbohydrate-active enzyme database: functions and literature
Élodie Drula, Marie-Line Garron, S. Doğan, et al.
Nucleic Acids Research (2021) Vol. 50, Iss. D1, pp. D571-D577
Open Access | Times Cited: 1496
Fast and accurate protein structure search with Foldseek
Michel van Kempen, Stephanie Kim, Charlotte Tumescheit, et al.
Nature Biotechnology (2023) Vol. 42, Iss. 2, pp. 243-246
Open Access | Times Cited: 1050
MODOMICS: a database of RNA modification pathways. 2021 update
Pietro Boccaletto, Filip Stefaniak, Angana Ray, et al.
Nucleic Acids Research (2021) Vol. 50, Iss. D1, pp. D231-D235
Open Access | Times Cited: 626
Therapeutic target database update 2022: facilitating drug discovery with enriched comparative data of targeted agents
Ying Zhou, Yintao Zhang, Xichen Lian, et al.
Nucleic Acids Research (2021) Vol. 50, Iss. D1, pp. D1398-D1407
Open Access | Times Cited: 501
RCSB Protein Data Bank (RCSB.org): delivery of experimentally-determined PDB structures alongside one million computed structure models of proteins from artificial intelligence/machine learning
S.K. Burley, Charmi Bhikadiya, Chunxiao Bi, et al.
Nucleic Acids Research (2022) Vol. 51, Iss. D1, pp. D488-D508
Open Access | Times Cited: 487
A structural biology community assessment of AlphaFold2 applications
Mehmet Akdel, Douglas E. V. Pires, Eduard Porta‐Pardo, et al.
Nature Structural & Molecular Biology (2022) Vol. 29, Iss. 11, pp. 1056-1067
Open Access | Times Cited: 466
IUPred3: prediction of protein disorder enhanced with unambiguous experimental annotation and visualization of evolutionary conservation
Gábor Erdős, Mátyás Pajkos, Zsuzsanna Dosztányi
Nucleic Acids Research (2021) Vol. 49, Iss. W1, pp. W297-W303
Open Access | Times Cited: 434
Single-sequence protein structure prediction using a language model and deep learning
Ratul Chowdhury, Nazim Bouatta, Surojit Biswas, et al.
Nature Biotechnology (2022) Vol. 40, Iss. 11, pp. 1617-1623
Open Access | Times Cited: 301
High-resolutionde novostructure prediction from primary sequence
Ruidong Wu, Fan Ding, Rui Wang, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2022)
Open Access | Times Cited: 280
Network pharmacology prediction and molecular docking-based strategy to explore the potential mechanism of Huanglian Jiedu Decoction against sepsis
Li Xing, Shizhang Wei, Shengqi Niu, et al.
Computers in Biology and Medicine (2022) Vol. 144, pp. 105389-105389
Closed Access | Times Cited: 267
Fast and accurate protein structure search with Foldseek
Michel van Kempen, Stephanie Kim, Charlotte Tumescheit, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2022)
Open Access | Times Cited: 248
Automated model building and protein identification in cryo-EM maps
Kiarash Jamali, Lukas Käll, Rui Zhang, et al.
Nature (2024) Vol. 628, Iss. 8007, pp. 450-457
Open Access | Times Cited: 239
DRAMP 3.0: an enhanced comprehensive data repository of antimicrobial peptides
Guobang Shi, Xinyue Kang, Fanyi Dong, et al.
Nucleic Acids Research (2021) Vol. 50, Iss. D1, pp. D488-D496
Open Access | Times Cited: 215
Drug Design by Pharmacophore and Virtual Screening Approach
Deborah Giordano, Carmen Biancaniello, Maria Antonia Argenio, et al.
Pharmaceuticals (2022) Vol. 15, Iss. 5, pp. 646-646
Open Access | Times Cited: 199
Annotation of biologically relevant ligands in UniProtKB using ChEBI
Elisabeth Coudert, Sébastien Géhant, Edouard de Castro, et al.
Bioinformatics (2022) Vol. 39, Iss. 1
Open Access | Times Cited: 195
Cross-Linking Mass Spectrometry for Investigating Protein Conformations and Protein–Protein Interactions─A Method for All Seasons
Lolita Piersimoni, Panagiotis L. Kastritis, Christian Arlt, et al.
Chemical Reviews (2021) Vol. 122, Iss. 8, pp. 7500-7531
Open Access | Times Cited: 193
RCSB Protein Data Bank: Architectural Advances Towards Integrated Searching and Efficient Access to Macromolecular Structure Data from the PDB Archive
Yana Rose, José M. Duarte, Robert Lowe, et al.
Journal of Molecular Biology (2020) Vol. 433, Iss. 11, pp. 166704-166704
Open Access | Times Cited: 182
Towards a structurally resolved human protein interaction network
David F. Burke, Patrick Bryant, Inigo Barrio‐Hernandez, et al.
Nature Structural & Molecular Biology (2023) Vol. 30, Iss. 2, pp. 216-225
Open Access | Times Cited: 179
Deep Learning in Virtual Screening: Recent Applications and Developments
Talia B. Kimber, Yonghui Chen, Andrea Volkamer
International Journal of Molecular Sciences (2021) Vol. 22, Iss. 9, pp. 4435-4435
Open Access | Times Cited: 160
GPCRdb in 2023: state-specific structure models using AlphaFold2 and new ligand resources
Gáspár Pándy‐Szekeres, Jimmy Caroli, Alibek Mamyrbekov, et al.
Nucleic Acids Research (2022) Vol. 51, Iss. D1, pp. D395-D402
Open Access | Times Cited: 142
CAMPR4: a database of natural and synthetic antimicrobial peptides
Ulka Gawde, Shuvechha Chakraborty, Faiza Hanif Waghu, et al.
Nucleic Acids Research (2022) Vol. 51, Iss. D1, pp. D377-D383
Open Access | Times Cited: 136
SCOPe: improvements to the structural classification of proteins – extended database to facilitate variant interpretation and machine learning
John‐Marc Chandonia, Lindsey Guan, Shiangyi Lin, et al.
Nucleic Acids Research (2021) Vol. 50, Iss. D1, pp. D553-D559
Open Access | Times Cited: 126
A Brief History of De Novo Protein Design: Minimal, Rational, and Computational
Derek N. Woolfson
Journal of Molecular Biology (2021) Vol. 433, Iss. 20, pp. 167160-167160
Open Access | Times Cited: 125
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