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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Flexible comparison of batch correction methods for single-cell RNA-seq using BatchBench
Ruben Chazarra-Gil, Stijn van Dongen, Vladimir Yu Kiselev, et al.
Nucleic Acids Research (2021) Vol. 49, Iss. 7, pp. e42-e42
Open Access | Times Cited: 58

Showing 1-25 of 58 citing articles:

Benchmarking atlas-level data integration in single-cell genomics
Malte D. Luecken, Maren Büttner, Kridsadakorn Chaichoompu, et al.
Nature Methods (2021) Vol. 19, Iss. 1, pp. 41-50
Open Access | Times Cited: 813
scMC learns biological variation through the alignment of multiple single-cell genomics datasets
Lihua Zhang, Qing Nie
Genome biology (2021) Vol. 22, Iss. 1
Open Access | Times Cited: 656
Best practices for single-cell analysis across modalities
Lukas Heumos, Anna C. Schaar, Christopher Lance, et al.
Nature Reviews Genetics (2023) Vol. 24, Iss. 8, pp. 550-572
Open Access | Times Cited: 535
Differential abundance testing on single-cell data using k-nearest neighbor graphs
Emma Dann, Neil C. Henderson, Sarah A. Teichmann, et al.
Nature Biotechnology (2021) Vol. 40, Iss. 2, pp. 245-253
Open Access | Times Cited: 493
Batch alignment of single-cell transcriptomics data using deep metric learning
Xiaokang Yu, Xinyi Xu, Jingxiao Zhang, et al.
Nature Communications (2023) Vol. 14, Iss. 1
Open Access | Times Cited: 44
Mapping the cardiac vascular niche in heart failure
Fabian Peisker, Maurice Halder, James S. Nagai, et al.
Nature Communications (2022) Vol. 13, Iss. 1
Open Access | Times Cited: 62
Sex differences in resilience to ferroptosis underlie sexual dimorphism in kidney injury and repair
Shintaro Ide, Kana Ide, Koki Abe, et al.
Cell Reports (2022) Vol. 41, Iss. 6, pp. 111610-111610
Open Access | Times Cited: 48
Deciphering endothelial heterogeneity in health and disease at single-cell resolution: progress and perspectives
Lisa M. Becker, Shiau-Haln Chen, Julie Rodor, et al.
Cardiovascular Research (2022) Vol. 119, Iss. 1, pp. 6-27
Open Access | Times Cited: 39
An integrated single-cell transcriptomic dataset for non-small cell lung cancer
Karolina Hanna Prazanowska, Su Bin Lim
Scientific Data (2023) Vol. 10, Iss. 1
Open Access | Times Cited: 28
Multiple parallel cell lineages in the developing mammalian cerebral cortex
Lucia Del-Valle-Anton, Salma Amin, Daniela Cimino, et al.
Science Advances (2024) Vol. 10, Iss. 13
Open Access | Times Cited: 11
Defining and benchmarking open problems in single-cell analysis
Malte D. Luecken, Scott Gigante, Daniel B. Burkhardt, et al.
Research Square (Research Square) (2024)
Open Access | Times Cited: 9
MultiMAP: dimensionality reduction and integration of multimodal data
Mika Sarkin Jain, Krzysztof Polański, Cecilia Domínguez Conde, et al.
Genome biology (2021) Vol. 22, Iss. 1
Open Access | Times Cited: 54
Adversarial domain translation networks for integrating large-scale atlas-level single-cell datasets
Jia Zhao, Gefei Wang, Jingsi Ming, et al.
Nature Computational Science (2022) Vol. 2, Iss. 5, pp. 317-330
Open Access | Times Cited: 31
Meta-Analysis of Human Cancer Single-Cell RNA-Seq Datasets Using the IMMUcan Database
J. Camps, Floriane Noël, Robin Liechti, et al.
Cancer Research (2022) Vol. 83, Iss. 3, pp. 363-373
Open Access | Times Cited: 30
An Atlas of Cells in the Human Tonsil
Ramon Massoni-Badosa, Paula Soler-Vila, Sergio Aguilar-Fernández, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2022)
Open Access | Times Cited: 29
The shaky foundations of simulating single-cell RNA sequencing data
Helena L. Crowell, Sarah X. Morillo Leonardo, Charlotte Soneson, et al.
Genome biology (2023) Vol. 24, Iss. 1
Open Access | Times Cited: 22
CellMixS: quantifying and visualizing batch effects in single-cell RNA-seq data
Almut Lütge, Joanna Zyprych-Walczak, Urszula Brykczynska Kunzmann, et al.
Life Science Alliance (2021) Vol. 4, Iss. 6, pp. e202001004-e202001004
Open Access | Times Cited: 40
Plasticity and heterogeneity of thermogenic adipose tissue
Wenfei Sun, Salvatore Modica, Hua Dong, et al.
Nature Metabolism (2021) Vol. 3, Iss. 6, pp. 751-761
Closed Access | Times Cited: 38
Research progress of single-cell transcriptome sequencing in autoimmune diseases and autoinflammatory disease: A review
Liuting Zeng, Kailin Yang, Tianqing Zhang, et al.
Journal of Autoimmunity (2022) Vol. 133, pp. 102919-102919
Closed Access | Times Cited: 26
Comprehensive evaluation of noise reduction methods for single-cell RNA sequencing data
Shih‐Kai Chu, Shilin Zhao, Yu Shyr, et al.
Briefings in Bioinformatics (2021) Vol. 23, Iss. 2
Open Access | Times Cited: 30
Replication of single-cell proteomics data reveals important computational challenges
Christophe Vanderaa, Laurent Gatto
Expert Review of Proteomics (2021) Vol. 18, Iss. 10, pp. 835-843
Open Access | Times Cited: 29
Single-cell transcriptomics reveals the role of Macrophage-Naïve CD4 + T cell interaction in the immunosuppressive microenvironment of primary liver carcinoma
Zhuomao Mo, Daiyuan Liu, Yihan Chen, et al.
Journal of Translational Medicine (2022) Vol. 20, Iss. 1
Open Access | Times Cited: 22
A Roadmap for a Consensus Human Skin Cell Atlas and Single-Cell Data Standardization
Axel A. Almet, Hao Yuan, Karl Annusver, et al.
Journal of Investigative Dermatology (2023) Vol. 143, Iss. 9, pp. 1667-1677
Open Access | Times Cited: 12
reComBat: batch-effect removal in large-scale multi-source gene-expression data integration
Michael F. Adamer, Sarah C. Brüningk, Alejandro Tejada-Arranz, et al.
Bioinformatics Advances (2022) Vol. 2, Iss. 1
Open Access | Times Cited: 17
Benchmark of Data Integration in Single-Cell Proteomics
Yaguo Gong, Yuntao Dai, Qibiao Wu, et al.
Analytical Chemistry (2025)
Closed Access
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