
OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!
If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.
Requested Article:
RCSB Protein Data Bank (RCSB.org): delivery of experimentally-determined PDB structures alongside one million computed structure models of proteins from artificial intelligence/machine learning
S.K. Burley, Charmi Bhikadiya, Chunxiao Bi, et al.
Nucleic Acids Research (2022) Vol. 51, Iss. D1, pp. D488-D508
Open Access | Times Cited: 487
S.K. Burley, Charmi Bhikadiya, Chunxiao Bi, et al.
Nucleic Acids Research (2022) Vol. 51, Iss. D1, pp. D488-D508
Open Access | Times Cited: 487
Showing 1-25 of 487 citing articles:
TTD: Therapeutic Target Database describing target druggability information
Ying Zhou, Yintao Zhang, Donghai Zhao, et al.
Nucleic Acids Research (2023) Vol. 52, Iss. D1, pp. D1465-D1477
Open Access | Times Cited: 229
Ying Zhou, Yintao Zhang, Donghai Zhao, et al.
Nucleic Acids Research (2023) Vol. 52, Iss. D1, pp. D1465-D1477
Open Access | Times Cited: 229
MODOMICS: a database of RNA modifications and related information. 2023 update
Andrea Cappannini, Angana Ray, Elżbieta Purta, et al.
Nucleic Acids Research (2023) Vol. 52, Iss. D1, pp. D239-D244
Open Access | Times Cited: 150
Andrea Cappannini, Angana Ray, Elżbieta Purta, et al.
Nucleic Acids Research (2023) Vol. 52, Iss. D1, pp. D239-D244
Open Access | Times Cited: 150
Revolutionizing Medicinal Chemistry: The Application of Artificial Intelligence (AI) in Early Drug Discovery
Ri Han, Hongryul Yoon, Gahee Kim, et al.
Pharmaceuticals (2023) Vol. 16, Iss. 9, pp. 1259-1259
Open Access | Times Cited: 72
Ri Han, Hongryul Yoon, Gahee Kim, et al.
Pharmaceuticals (2023) Vol. 16, Iss. 9, pp. 1259-1259
Open Access | Times Cited: 72
A Transformer-Based Ensemble Framework for the Prediction of Protein–Protein Interaction Sites
Minjie Mou, Ziqi Pan, Zhimeng Zhou, et al.
Research (2023) Vol. 6
Open Access | Times Cited: 57
Minjie Mou, Ziqi Pan, Zhimeng Zhou, et al.
Research (2023) Vol. 6
Open Access | Times Cited: 57
EMDB—the Electron Microscopy Data Bank
Jack Turner, Sanja Abbott, Neli Fonseca, et al.
Nucleic Acids Research (2023) Vol. 52, Iss. D1, pp. D456-D465
Open Access | Times Cited: 51
Jack Turner, Sanja Abbott, Neli Fonseca, et al.
Nucleic Acids Research (2023) Vol. 52, Iss. D1, pp. D456-D465
Open Access | Times Cited: 51
From interaction networks to interfaces, scanning intrinsically disordered regions using AlphaFold2
Hélène Bret, Jinmei Gao, Diego Javier Zea, et al.
Nature Communications (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 49
Hélène Bret, Jinmei Gao, Diego Javier Zea, et al.
Nature Communications (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 49
RCSB protein Data Bank: exploring protein 3D similarities via comprehensive structural alignments
Sebastian Bittrich, Joan Segura, José M. Duarte, et al.
Bioinformatics (2024) Vol. 40, Iss. 6
Open Access | Times Cited: 46
Sebastian Bittrich, Joan Segura, José M. Duarte, et al.
Bioinformatics (2024) Vol. 40, Iss. 6
Open Access | Times Cited: 46
De novo variants in the RNU4-2 snRNA cause a frequent neurodevelopmental syndrome
Yuyang Chen, Ruebena Dawes, Hyung Chul Kim, et al.
Nature (2024) Vol. 632, Iss. 8026, pp. 832-840
Open Access | Times Cited: 28
Yuyang Chen, Ruebena Dawes, Hyung Chul Kim, et al.
Nature (2024) Vol. 632, Iss. 8026, pp. 832-840
Open Access | Times Cited: 28
Bilingual language model for protein sequence and structure
Michael Heinzinger, Konstantin Weißenow, Joaquin Gomez Sanchez, et al.
NAR Genomics and Bioinformatics (2024) Vol. 6, Iss. 4
Open Access | Times Cited: 25
Michael Heinzinger, Konstantin Weißenow, Joaquin Gomez Sanchez, et al.
NAR Genomics and Bioinformatics (2024) Vol. 6, Iss. 4
Open Access | Times Cited: 25
CHARMM at 45: Enhancements in Accessibility, Functionality, and Speed
Wonmuk Hwang, Steven L. Austin, Arnaud Blondel, et al.
The Journal of Physical Chemistry B (2024) Vol. 128, Iss. 41, pp. 9976-10042
Open Access | Times Cited: 22
Wonmuk Hwang, Steven L. Austin, Arnaud Blondel, et al.
The Journal of Physical Chemistry B (2024) Vol. 128, Iss. 41, pp. 9976-10042
Open Access | Times Cited: 22
Navigating the landscape of enzyme design: from molecular simulations to machine learning
Jiahui Zhou, Meilan Huang
Chemical Society Reviews (2024) Vol. 53, Iss. 16, pp. 8202-8239
Open Access | Times Cited: 21
Jiahui Zhou, Meilan Huang
Chemical Society Reviews (2024) Vol. 53, Iss. 16, pp. 8202-8239
Open Access | Times Cited: 21
MoDAFold: a strategy for predicting the structure of missense mutant protein based on AlphaFold2 and molecular dynamics
Lingyan Zheng, Shuiyang Shi, Xiuna Sun, et al.
Briefings in Bioinformatics (2024) Vol. 25, Iss. 2
Open Access | Times Cited: 19
Lingyan Zheng, Shuiyang Shi, Xiuna Sun, et al.
Briefings in Bioinformatics (2024) Vol. 25, Iss. 2
Open Access | Times Cited: 19
Hydrogels: Classifications, fundamental properties, applications, and scopes in recent advances in tissue engineering and regenerative medicine – A comprehensive review
Muhammad Umar Aslam Khan, Muhammad Azhar Aslam, Mohd Faizal Abdullah, et al.
Arabian Journal of Chemistry (2024) Vol. 17, Iss. 10, pp. 105968-105968
Open Access | Times Cited: 17
Muhammad Umar Aslam Khan, Muhammad Azhar Aslam, Mohd Faizal Abdullah, et al.
Arabian Journal of Chemistry (2024) Vol. 17, Iss. 10, pp. 105968-105968
Open Access | Times Cited: 17
Network pharmacology: a crucial approach in traditional Chinese medicine research
Yiyan Zhai, Liu Liu, Fanqin Zhang, et al.
Chinese Medicine (2025) Vol. 20, Iss. 1
Open Access | Times Cited: 6
Yiyan Zhai, Liu Liu, Fanqin Zhang, et al.
Chinese Medicine (2025) Vol. 20, Iss. 1
Open Access | Times Cited: 6
AlphaFold prediction of structural ensembles of disordered proteins
Z. Faidon Brotzakis, Shengyu Zhang, Mhd Hussein Murtada, et al.
Nature Communications (2025) Vol. 16, Iss. 1
Open Access | Times Cited: 3
Z. Faidon Brotzakis, Shengyu Zhang, Mhd Hussein Murtada, et al.
Nature Communications (2025) Vol. 16, Iss. 1
Open Access | Times Cited: 3
Dapagliflozin in Chronic Kidney Disease: Insights from Network Pharmacology and Molecular Docking Simulation
Atthaphong Phongphithakchai, Aman Tedasen, Ratana Netphakdee, et al.
Life (2025) Vol. 15, Iss. 3, pp. 437-437
Open Access | Times Cited: 2
Atthaphong Phongphithakchai, Aman Tedasen, Ratana Netphakdee, et al.
Life (2025) Vol. 15, Iss. 3, pp. 437-437
Open Access | Times Cited: 2
RCSB Protein Data Bank: Efficient Searching and Simultaneous Access to One Million Computed Structure Models Alongside the PDB Structures Enabled by Architectural Advances
Sebastian Bittrich, Charmi Bhikadiya, Chunxiao Bi, et al.
Journal of Molecular Biology (2023) Vol. 435, Iss. 14, pp. 167994-167994
Open Access | Times Cited: 41
Sebastian Bittrich, Charmi Bhikadiya, Chunxiao Bi, et al.
Journal of Molecular Biology (2023) Vol. 435, Iss. 14, pp. 167994-167994
Open Access | Times Cited: 41
ADCdb: the database of antibody–drug conjugates
Liteng Shen, Xiuna Sun, Zhen Chen, et al.
Nucleic Acids Research (2023) Vol. 52, Iss. D1, pp. D1097-D1109
Open Access | Times Cited: 33
Liteng Shen, Xiuna Sun, Zhen Chen, et al.
Nucleic Acids Research (2023) Vol. 52, Iss. D1, pp. D1097-D1109
Open Access | Times Cited: 33
Erianin inhibits the growth and metastasis through autophagy-dependent ferroptosis in KRASG13D colorectal cancer
Qun Miao, Wei-Qing Deng, Wen-Yu Lyu, et al.
Free Radical Biology and Medicine (2023) Vol. 204, pp. 301-312
Closed Access | Times Cited: 32
Qun Miao, Wei-Qing Deng, Wen-Yu Lyu, et al.
Free Radical Biology and Medicine (2023) Vol. 204, pp. 301-312
Closed Access | Times Cited: 32
GPCNDTA: Prediction of drug-target binding affinity through cross-attention networks augmented with graph features and pharmacophores
Li Zhang, Chun-Chun Wang, Zhang Yon, et al.
Computers in Biology and Medicine (2023) Vol. 166, pp. 107512-107512
Closed Access | Times Cited: 25
Li Zhang, Chun-Chun Wang, Zhang Yon, et al.
Computers in Biology and Medicine (2023) Vol. 166, pp. 107512-107512
Closed Access | Times Cited: 25
The 2023 Nucleic Acids Research Database Issue and the online molecular biology database collection
Daniel J. Rigden, Xosé M. Fernández
Nucleic Acids Research (2023) Vol. 51, Iss. D1, pp. D1-D8
Open Access | Times Cited: 24
Daniel J. Rigden, Xosé M. Fernández
Nucleic Acids Research (2023) Vol. 51, Iss. D1, pp. D1-D8
Open Access | Times Cited: 24
A Comprehensive Resource for Exploring Antiphage Defense: DefenseFinder Webservice, Wiki and Databases.
Florian Tesson, Rémi Planel, Artyom A. Egorov, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 15
Florian Tesson, Rémi Planel, Artyom A. Egorov, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 15
DisoFLAG: accurate prediction of protein intrinsic disorder and its functions using graph-based interaction protein language model
Yihe Pang, Bin Liu
BMC Biology (2024) Vol. 22, Iss. 1
Open Access | Times Cited: 14
Yihe Pang, Bin Liu
BMC Biology (2024) Vol. 22, Iss. 1
Open Access | Times Cited: 14
Allosteric communication and signal transduction in proteins
Nan Wu, Mauricio Barahona, Sophia N. Yaliraki
Current Opinion in Structural Biology (2024) Vol. 84, pp. 102737-102737
Open Access | Times Cited: 14
Nan Wu, Mauricio Barahona, Sophia N. Yaliraki
Current Opinion in Structural Biology (2024) Vol. 84, pp. 102737-102737
Open Access | Times Cited: 14
Modeling Flexible Protein Structure With AlphaFold2 and Crosslinking Mass Spectrometry
Karen Manalastas-Cantos, Kish R. Adoni, Matthias Pfeifer, et al.
Molecular & Cellular Proteomics (2024) Vol. 23, Iss. 3, pp. 100724-100724
Open Access | Times Cited: 14
Karen Manalastas-Cantos, Kish R. Adoni, Matthias Pfeifer, et al.
Molecular & Cellular Proteomics (2024) Vol. 23, Iss. 3, pp. 100724-100724
Open Access | Times Cited: 14