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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Identification and remediation of biases in the activity of RNA ligases in small-RNA deep sequencing
Anitha D. Jayaprakash, Omar Jabado, Brian D. Brown, et al.
Nucleic Acids Research (2011) Vol. 39, Iss. 21, pp. e141-e141
Open Access | Times Cited: 250

Showing 1-25 of 250 citing articles:

Transcriptional Silencing of Transposons by Piwi and Maelstrom and Its Impact on Chromatin State and Gene Expression
Grzegorz Sienski, Derya Dönertas, Julius Brennecke
Cell (2012) Vol. 151, Iss. 5, pp. 964-980
Open Access | Times Cited: 627
RNA‐Seq methods for transcriptome analysis
Radmila Hrdličková, Masoud Toloue, Bin Tian
Wiley Interdisciplinary Reviews - RNA (2016) Vol. 8, Iss. 1
Open Access | Times Cited: 561
ShortStack: Comprehensive annotation and quantification of small RNA genes
Michael J. Axtell
RNA (2013) Vol. 19, Iss. 6, pp. 740-751
Open Access | Times Cited: 437
The Rhino-Deadlock-Cutoff Complex Licenses Noncanonical Transcription of Dual-Strand piRNA Clusters in Drosophila
Fabio Mohn, Grzegorz Sienski, Dominik Handler, et al.
Cell (2014) Vol. 157, Iss. 6, pp. 1364-1379
Open Access | Times Cited: 400
Improved Ribosome-Footprint and mRNA Measurements Provide Insights into Dynamics and Regulation of Yeast Translation
David E. Weinberg, Premal Shah, Stephen W. Eichhorn, et al.
Cell Reports (2016) Vol. 14, Iss. 7, pp. 1787-1799
Open Access | Times Cited: 397
Library preparation methods for next-generation sequencing: Tone down the bias
Erwin L. van Dijk, Yan Jaszczyszyn, Claude Thermes
Experimental Cell Research (2014) Vol. 322, Iss. 1, pp. 12-20
Closed Access | Times Cited: 378
High-throughput assessment of microRNA activity and function using microRNA sensor and decoy libraries
Gavriel Mullokandov, Alessia Baccarini, Albert Ruzo, et al.
Nature Methods (2012) Vol. 9, Iss. 8, pp. 840-846
Open Access | Times Cited: 369
piRNA-guided slicing specifies transcripts for Zucchini-dependent, phased piRNA biogenesis
Fabio Mohn, Dominik Handler, Julius Brennecke
Science (2015) Vol. 348, Iss. 6236, pp. 812-817
Open Access | Times Cited: 353
Small RNAs Are Trafficked from the Epididymis to Developing Mammalian Sperm
Upasna Sharma, Fengyun Sun, Colin C. Conine, et al.
Developmental Cell (2018) Vol. 46, Iss. 4, pp. 481-494.e6
Open Access | Times Cited: 339
Not All Sequence Tags Are Created Equal: Designing and Validating Sequence Identification Tags Robust to Indels
Brant C. Faircloth, Travis C. Glenn
PLoS ONE (2012) Vol. 7, Iss. 8, pp. e42543-e42543
Open Access | Times Cited: 280
exRNA Atlas Analysis Reveals Distinct Extracellular RNA Cargo Types and Their Carriers Present across Human Biofluids
Oscar Murillo, William Thistlethwaite, Joel Rozowsky, et al.
Cell (2019) Vol. 177, Iss. 2, pp. 463-477.e15
Open Access | Times Cited: 260
A heterochromatin-dependent transcription machinery drives piRNA expression
Peter Refsing Andersen, László Tirián, Milica Vunjak, et al.
Nature (2017) Vol. 549, Iss. 7670, pp. 54-59
Open Access | Times Cited: 258
Forgotten fungi—the gut mycobiome in human health and disease
Chloe E. Huseyin, Paul W. O’Toole, Paul D. Cotter, et al.
FEMS Microbiology Reviews (2017) Vol. 41, Iss. 4, pp. 479-511
Open Access | Times Cited: 247
The Genetic Makeup of the Drosophila piRNA Pathway
Dominik Handler, Katharina Meixner, Manfred Pizka, et al.
Molecular Cell (2013) Vol. 50, Iss. 5, pp. 762-777
Open Access | Times Cited: 225
Circulating miRNA analysis for cancer diagnostics and therapy
Lukás Valihrach, Peter Androvic, Mikael Kubista
Molecular Aspects of Medicine (2019) Vol. 72, pp. 100825-100825
Closed Access | Times Cited: 165
Time-Resolved Small RNA Sequencing Unravels the Molecular Principles of MicroRNA Homeostasis
Brian Reichholf, Veronika A. Herzog, Nina Fasching, et al.
Molecular Cell (2019) Vol. 75, Iss. 4, pp. 756-768.e7
Open Access | Times Cited: 146
Exploring the expanding universe of small RNAs
Junchao Shi, Tong Zhou, Qi Chen
Nature Cell Biology (2022) Vol. 24, Iss. 4, pp. 415-423
Open Access | Times Cited: 127
Revealing microRNA regulation in single cells
Ranjan Kumar Maji, Matthias S. Leisegang, Reinier A. Boon, et al.
Trends in Genetics (2025)
Open Access | Times Cited: 3
Biases in small RNA deep sequencing data
Carsten A. Raabe, Thean‐Hock Tang, Juergen Brosius, et al.
Nucleic Acids Research (2013) Vol. 42, Iss. 3, pp. 1414-1426
Open Access | Times Cited: 199
Reducing ligation bias of small RNAs in libraries for next generation sequencing
Karim Sorefan, Helio Pais, Adam E. Hall, et al.
Silence (2012) Vol. 3, Iss. 1
Open Access | Times Cited: 194
Structural bias in T4 RNA ligase-mediated 3′-adapter ligation
Fanglei Zhuang, Ryan T. Fuchs, Zhiyi Sun, et al.
Nucleic Acids Research (2012) Vol. 40, Iss. 7, pp. e54-e54
Open Access | Times Cited: 192
Silencio/CG9754 connects the Piwi–piRNA complex to the cellular heterochromatin machinery
Grzegorz Sienski, Júlia Batki, Kirsten-André Senti, et al.
Genes & Development (2015) Vol. 29, Iss. 21, pp. 2258-2271
Open Access | Times Cited: 174
Bias in Ligation-Based Small RNA Sequencing Library Construction Is Determined by Adaptor and RNA Structure
Ryan T. Fuchs, Zhiyi Sun, Fanglei Zhuang, et al.
PLoS ONE (2015) Vol. 10, Iss. 5, pp. e0126049-e0126049
Open Access | Times Cited: 164
Ago HITS-CLIP Expands Understanding of Kaposi's Sarcoma-associated Herpesvirus miRNA Function in Primary Effusion Lymphomas
Irina Haecker, Lauren A. Gay, Yajie Yang, et al.
PLoS Pathogens (2012) Vol. 8, Iss. 8, pp. e1002884-e1002884
Open Access | Times Cited: 163
Comprehensive multi-center assessment of small RNA-seq methods for quantitative miRNA profiling
María D. Giraldez, Ryan M. Spengler, Alton Etheridge, et al.
Nature Biotechnology (2018) Vol. 36, Iss. 8, pp. 746-757
Open Access | Times Cited: 159
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