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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Epidemiological inference from pathogen genomes: A review of phylodynamic models and applications
Leo Featherstone, Joshua M Zhang, Timothy G. Vaughan, et al.
Virus Evolution (2022) Vol. 8, Iss. 1
Open Access | Times Cited: 26

Showing 1-25 of 26 citing articles:

Real-time genomic surveillance for enhanced control of infectious diseases and antimicrobial resistance
Marc Struelens, Catherine Ludden, Guido Werner, et al.
Frontiers in Science (2024) Vol. 2
Open Access | Times Cited: 24
Exploring SNP filtering strategies: the influence of strict vs soft core
Mona L. Taouk, Leo Featherstone, George Taiaroa, et al.
Microbial Genomics (2025) Vol. 11, Iss. 1
Open Access | Times Cited: 1
Clockor2: Inferring Global and Local Strict Molecular Clocks Using Root-to-Tip Regression
Leo Featherstone, Andrew Rambaut, Sebastián Duchêne, et al.
Systematic Biology (2024) Vol. 73, Iss. 3, pp. 623-628
Open Access | Times Cited: 5
Looking back into the Hepatitis C Virus epidemic dynamics from Unnao, India through phylogenetic approach
Ajit Patil, Pallavi Vidhate, Sandip Patil, et al.
PLoS ONE (2025) Vol. 20, Iss. 1, pp. e0317705-e0317705
Open Access
Fine-scale patterns of SARS-CoV-2 spread from identical pathogen sequences
Cécile Tran Kiem, Miguel I. Paredes, Amanda C. Perofsky, et al.
Nature (2025)
Open Access
Evolutionary and epidemic dynamics of COVID-19 in Germany exemplified by three Bayesian phylodynamic case studies
Sanni Översti, Ariane Weber, Viktor Baran, et al.
Bioinformatics and Biology Insights (2025) Vol. 19
Open Access
Tracking Seasonal Influenza Trends in South Tyrol During 2022/2023 Using Genomic Surveillance Data
Irene Bianconi, Mattia Manica, Elena Moroder, et al.
Influenza and Other Respiratory Viruses (2025) Vol. 19, Iss. 4
Open Access
How does date-rounding affect phylodynamic inference for public health?
Leo Featherstone, Danielle J. Ingle, Wytamma Wirth, et al.
PLoS Computational Biology (2025) Vol. 21, Iss. 4, pp. e1012900-e1012900
Open Access
Evaluating the performance of Plasmodium falciparum genetic metrics for inferring National Malaria Control Programme reported incidence in Senegal
Wesley Wong, S. F. Schaffner, Julie Thwing, et al.
Malaria Journal (2024) Vol. 23, Iss. 1
Open Access | Times Cited: 3
Integrative genomics would strengthen AMR understanding through ONE health approach
Chinky Shiu Chen Liu, Rajesh Pandey
Heliyon (2024) Vol. 10, Iss. 14, pp. e34719-e34719
Open Access | Times Cited: 3
Two Decades of Wildlife Pathogen Surveillance: Case Study of Choclo orthohantavirus and Its Wild Reservoir Oligoryzomys costaricensis
Publio González, Jacqueline R. Salazar, Tybbysay P. Salinas, et al.
Viruses (2023) Vol. 15, Iss. 6, pp. 1390-1390
Open Access | Times Cited: 7
e3SIM: epidemiological-ecological-evolutionary simulation framework for genomic epidemiology
Peiyu Xu, Shenni Liang, Andrew W. Hahn, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 2
Decoding the Fundamental Drivers of Phylodynamic Inference
Leo Featherstone, Sebastián Duchêne, Timothy G. Vaughan
Molecular Biology and Evolution (2023) Vol. 40, Iss. 6
Open Access | Times Cited: 5
Evaluating the performance of Plasmodium falciparum genetics for inferring National Malaria Control Program reported incidence in Senegal
Wesley Wong, S. F. Schaffner, Julie Thwing, et al.
Research Square (Research Square) (2023)
Open Access | Times Cited: 4
A method for characterizing disease emergence curves from paired pathogen detection and serology data
Joshua Hewitt, Grete Wilson‐Henjum, Derek T. Collins, et al.
Methods in Ecology and Evolution (2024) Vol. 15, Iss. 9, pp. 1677-1690
Open Access | Times Cited: 1
Investigating and forecasting infectious disease dynamics using epidemiological and molecular surveillance data
Gerardo Chowell, Pavel Skums
Physics of Life Reviews (2024) Vol. 51, pp. 294-327
Closed Access | Times Cited: 1
Clockor2: Inferring global and local strict molecular clocks using root-to-tip regression
Leo Featherstone, Andrew Rambaut, Sebastián Duchêne, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 3
Molecular epidemiology of the HIV-1 epidemic in Fiji
Atlesh Sudhakar, Donald Wilson, Rachel Devi, et al.
npj Viruses (2024) Vol. 2, Iss. 1
Open Access
Characterising HIV-1 transmission in Victoria, Australia: a molecular epidemiological study
George Taiaroa, Doris Chibo, Sophie Herman, et al.
The Lancet Regional Health - Western Pacific (2024) Vol. 47, pp. 101103-101103
Open Access
Modeling zoonotic and vector-borne viruses
Seth Judson, David W. Dowdy
Current Opinion in Virology (2024) Vol. 67, pp. 101428-101428
Closed Access
Exploring SNP Filtering Strategies: The Influence of Strict vs Soft Core
Mona L. Taouk, Leo Featherstone, George Taiaroa, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access
Applying Prospective Tree-Temporal Scan Statistics to Genomic Surveillance Data to Detect Emerging SARS-CoV-2 Variants and Salmonellosis Clusters in New York City
Sharon K. Greene, Julia Latash, Eric Peterson, et al.
medRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access
PhyloCNN: Improving tree representation and neural network architecture for deep learning from trees in phylodynamics and diversification studies
Manolo F. Perez, Olivier Gascuel
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access
adaPop: Bayesian inference of dependent population dynamics in coalescent models
Lorenzo Cappello, Jaehee Kim, Julia A. Palacios
PLoS Computational Biology (2023) Vol. 19, Iss. 3, pp. e1010897-e1010897
Open Access
Molecular epidemiology of the HIV-1 epidemic in Fiji
Atlesh Sudhakar, Donald Wilson, Rachel Devi, et al.
Research Square (Research Square) (2023)
Open Access
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