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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

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Showing 21 citing articles:

Evaluation of taxonomic classification and profiling methods for long-read shotgun metagenomic sequencing datasets
Daniel M. Portik, C. Titus Brown, N. Tessa Pierce‐Ward
BMC Bioinformatics (2022) Vol. 23, Iss. 1
Open Access | Times Cited: 78
An in-depth evaluation of metagenomic classifiers for soil microbiomes
Niranjana Rose Edwin, Amy Fitzpatrick, Fiona Brennan, et al.
Environmental Microbiome (2024) Vol. 19, Iss. 1
Open Access | Times Cited: 10
Interpretation of vaginal metagenomic characteristics in different types of vaginitis
Jiarong Song, Xue Dong, Yue Lan, et al.
mSystems (2024) Vol. 9, Iss. 3
Open Access | Times Cited: 8
Enhancing Clinical Utility: Utilization of International Standards and Guidelines for Metagenomic Sequencing in Infectious Disease Diagnosis
Chau-Ming Kan, Hin Fung Tsang, Xiao M. Pei, et al.
International Journal of Molecular Sciences (2024) Vol. 25, Iss. 6, pp. 3333-3333
Open Access | Times Cited: 7
Respiratory metagenomics: route to routine service
Jonathan D. Edgeworth
Current Opinion in Infectious Diseases (2023) Vol. 36, Iss. 2, pp. 115-123
Open Access | Times Cited: 16
Rapid metagenomic sequencing for diagnosis and antimicrobial sensitivity prediction of canine bacterial infections
Natalie Ring, Alison S. Low, Bryan A. Wee, et al.
Microbial Genomics (2023) Vol. 9, Iss. 7
Open Access | Times Cited: 13
Impact of database choice and confidence score on the performance of taxonomic classification using Kraken2
Yunlong Liu, Morteza H. Ghaffari, Tao Ma, et al.
aBIOTECH (2024) Vol. 5, Iss. 4, pp. 465-475
Open Access | Times Cited: 4
Evaluating metagenomics and targeted approaches for diagnosis and surveillance of viruses
Sarah Buddle, Leysa Forrest, Naomi Akinsuyi, et al.
Genome Medicine (2024) Vol. 16, Iss. 1
Open Access | Times Cited: 4
Unveiling the microbiome during post-partum uterine infection: a deep shotgun sequencing approach to characterize the dairy cow uterine microbiome
Carl Basbas, Adriana Garzon, Cory Schlesener, et al.
Animal Microbiome (2023) Vol. 5, Iss. 1
Open Access | Times Cited: 10
Anellovirus abundance as an indicator for viral metagenomic classifier utility in plasma samples
Gabriel Montenegro de Campos, Luan Gaspar Clemente, Alex Ranieri Jerônimo Lima, et al.
Virology Journal (2025) Vol. 22, Iss. 1
Open Access
Evaluation of the taxonomic classification tools and visualizers for metagenomic analysis using the Oxford nanopore sequence database
Abraam S Bebawy, Bishoy T. Saad, Mina T. Saad, et al.
Journal of Applied Genetics (2025)
Closed Access
Biases from Oxford Nanopore library preparation kits and their effects on microbiome and genome analysis
Ziming Chen, Chian Teng Ong, Loan Nguyen, et al.
BMC Genomics (2025) Vol. 26, Iss. 1
Open Access
Development of a portable on-site applicable metagenomic data generation workflow for enhanced pathogen and antimicrobial resistance surveillance
Bram Bloemen, Mathieu Gand, Kevin Vanneste, et al.
Scientific Reports (2023) Vol. 13, Iss. 1
Open Access | Times Cited: 7
Evaluating metagenomics and targeted approaches for diagnosis and surveillance of viruses
Sarah Buddle, Leysa Forrest, Naomi Akinsuyi, et al.
medRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 2
HiTaxon: a hierarchical ensemble framework for taxonomic classification of short reads
Bhavish Verma, John Parkinson
Bioinformatics Advances (2024) Vol. 4, Iss. 1
Open Access | Times Cited: 1
Biases from Nanopore library preparation kits and their effects on microbiome and genome analysis
Ziming Chen, Chian Teng Ong, Loan Nguyen, et al.
Research Square (Research Square) (2024)
Open Access | Times Cited: 1
Evaluation of DNA extraction kits for long-read shotgun metagenomics using Oxford Nanopore sequencing for rapid taxonomic and antimicrobial resistance detection
Srinithi Purushothaman, Marco Meola, Tim Roloff, et al.
Scientific Reports (2024) Vol. 14, Iss. 1
Open Access | Times Cited: 1
nf-core/taxprofiler: highly parallelised and flexible pipeline for metagenomic taxonomic classification and profiling
Sofia Stamouli, Moritz Emanuel Beber, Tanja Normark, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 3
PathoGFAIR: a collection of FAIR and adaptable (meta)genomics workflows for (foodborne) pathogens detection and tracking
Engy Nasr, Anna Henger, Björn Grüning, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access
Benchmarking bacterial taxonomic classification using nanopore metagenomics data of several mock communities
Alexander Van Uffelen, Andrés Posadas, Nancy H. C. Roosens, et al.
Scientific Data (2024) Vol. 11, Iss. 1
Open Access
An In-depth Evaluation of Metagenomic Classifiers for Soil Microbiomes
Niranjana Rose Edwin, Amy Fitzpatrick, Fiona Brennan, et al.
Research Square (Research Square) (2023)
Open Access
Sequence Analysis of the Plastomes of Two Tibetan Medicinal Plants of the Family Papaveraceae
Danyang Wu, Qian Qin, Xiaoyun Wang, et al.
Frontiers in Bioscience-Landmark (2023) Vol. 28, Iss. 12, pp. 352-352
Open Access
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