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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Oxford Nanopore R10.4 long-read sequencing enables near-perfect bacterial genomes from pure cultures and metagenomes without short-read or reference polishing
Mantas Sereika, Rasmus Hansen Kirkegaard, Søren Michael Karst, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2021)
Open Access | Times Cited: 33

Showing 1-25 of 33 citing articles:

Nanopore long-read-only metagenomics enables complete and high-quality genome reconstruction from mock and complex metagenomes
Lei Liu, Yang Yu, Yu Deng, et al.
Microbiome (2022) Vol. 10, Iss. 1
Open Access | Times Cited: 62
Nanopore-only assemblies for genomic surveillance of the global priority drug-resistant pathogen, Klebsiella pneumoniae
Ebenezer Foster-Nyarko, Hugh Cottingham, Ryan R. Wick, et al.
Microbial Genomics (2023) Vol. 9, Iss. 2
Open Access | Times Cited: 32
Strategies and tools in illumina and nanopore‐integrated metagenomic analysis of microbiome data
Yu Xia, Xiang Li, Ziqi Wu, et al.
iMeta (2023) Vol. 2, Iss. 1
Open Access | Times Cited: 19
Amplification and sequencing of entire tick mitochondrial genomes for a phylogenomic analysis
Alexander R. Kneubehl, Sebastián Muñoz‐Leal, Serhii Filatov, et al.
Scientific Reports (2022) Vol. 12, Iss. 1
Open Access | Times Cited: 23
From genome structure to function: insights into structural variation in microbiology
Patrick T. West, Rachael B. Chanin, Ami S. Bhatt
Current Opinion in Microbiology (2022) Vol. 69, pp. 102192-102192
Open Access | Times Cited: 22
Taking hospital pathogen surveillance to the next level
Guido Werner, Natacha Couto, Edward J. Feil, et al.
Microbial Genomics (2023) Vol. 9, Iss. 4
Open Access | Times Cited: 13
Plant Genome Sequencing: Modern Technologies and Novel Opportunities for Breeding
Alexey A. Dmitriev, Elena N. Pushkova, Nataliya V. Melnikova
Molecular Biology (2022) Vol. 56, Iss. 4, pp. 495-507
Closed Access | Times Cited: 18
Utilisation of Oxford Nanopore sequencing to generate six complete gastropod mitochondrial genomes as part of a biodiversity curriculum
Mattia De Vivo, Hsin‐Han Lee, Yu‐Sin Huang, et al.
Scientific Reports (2022) Vol. 12, Iss. 1
Open Access | Times Cited: 17
Diverse Populations of Staphylococcus pseudintermedius Colonize the Skin of Healthy Dogs
Norma Fàbregas, Daniel Pérez, Joaquim Viñes, et al.
Microbiology Spectrum (2023) Vol. 11, Iss. 2
Open Access | Times Cited: 10
Comparison of Nanopore with Illumina Whole Genome Assemblies of the Epstein-Barr Virus in Burkitt Lymphoma
Isaac E. Kim, Abebe A. Fola, Enrique Puig, et al.
medRxiv (Cold Spring Harbor Laboratory) (2025)
Open Access
Comparison of nanopore with illumina whole genome assemblies of the Epstein-Barr virus in Burkitt lymphoma
Isaac E. Kim, Abebe A. Fola, Enrique Puig, et al.
Scientific Reports (2025) Vol. 15, Iss. 1
Open Access
MinION Nanopore Sequencing Accelerates Progress towards Ubiquitous Genetics in Water Research
David Werner, Kishor Acharya, Adrian Blackburn, et al.
Water (2022) Vol. 14, Iss. 16, pp. 2491-2491
Open Access | Times Cited: 16
Revisiting genomes of non-model species with long reads yields new insights into their biology and evolution
Nadège Guiglielmoni, Laura I. Villegas, Joseph Kirangwa, et al.
Frontiers in Genetics (2024) Vol. 15
Open Access | Times Cited: 3
MicrobeMod: A computational toolkit for identifying prokaryotic methylation and restriction-modification with nanopore sequencing
Alexander Crits‐Christoph, Shinyoung Clair Kang, Henry H. Lee, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 8
Novel canine high-quality metagenome-assembled genomes, prophages and host-associated plasmids provided by long-read metagenomics together with Hi-C proximity ligation
Anna Cuscó, Daniel Pérez, Joaquim Viñes, et al.
Microbial Genomics (2022) Vol. 8, Iss. 3
Open Access | Times Cited: 11
Whole-genome based strain identification of fowlpox virus directly from cutaneous tissue and propagated virus
Kinza Asif, Denise O’Rourke, Alistair R. Legione, et al.
PLoS ONE (2021) Vol. 16, Iss. 12, pp. e0261122-e0261122
Open Access | Times Cited: 14
Identification of plasmids in avian-associated Escherichia coli using nanopore and illumina sequencing
Haley Sanderson, Madeline C. McCarthy, Chinenye R. Nnajide, et al.
BMC Genomics (2023) Vol. 24, Iss. 1
Open Access | Times Cited: 5
A deep dive into genome assemblies of non-vertebrate animals
Nadège Guiglielmoni, Ramón E. Rivera‐Vicéns, Romain Koszul, et al.
Peer Community Journal (2022) Vol. 2
Open Access | Times Cited: 7
Subtyping Evaluation of Salmonella Enteritidis Using Single Nucleotide Polymorphism and Core Genome Multilocus Sequence Typing with Nanopore Reads
Zhihan Xian, Shaoting Li, David A. Mann, et al.
Applied and Environmental Microbiology (2022) Vol. 88, Iss. 15
Open Access | Times Cited: 5
Metagenomic binning with assembly graph embeddings
André Lamúrias, Mantas Sereika, Mads Albertsen, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2022)
Open Access | Times Cited: 4
Revisiting genomes of non-model species with long reads yields new insights into their biology and evolution
Nadège Guiglielmoni, Laura I. Villegas, Joseph Kirangwa, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 2
Closed genomes uncover a saltwater species ofCandidatusElectronema and shed new light on the boundary between marine and freshwater cable bacteria
Mantas Sereika, Francesca Petriglieri, Thomas Bygh Nymann Jensen, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2022)
Open Access | Times Cited: 3
Nanopore sequencing for real-time genomic surveillance ofPlasmodium falciparum
Sophia T. Girgis, Edem Adika, Felix E. Nenyewodey, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2022)
Open Access | Times Cited: 3
Accuracy and Completeness of Long Read Metagenomic Assemblies
Jeremy Buttler, Devin M. Drown
Microorganisms (2022) Vol. 11, Iss. 1, pp. 96-96
Open Access | Times Cited: 3
A Deep Dive into Genome Assemblies of Non-vertebrate Animals
Nadège Guiglielmoni, Ramón E. Rivera‐Vicéns, Romain Koszul, et al.
(2022)
Open Access | Times Cited: 2
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