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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Genome-wide prediction of disease variants with a deep protein language model
Nadav Brandes, Grant Goldman, Charlotte H. Wang, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2022)
Open Access | Times Cited: 26

Showing 1-25 of 26 citing articles:

Evolutionary-scale prediction of atomic level protein structure with a language model
Zeming Lin, Halil Akin, Roshan Rao, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2022)
Open Access | Times Cited: 260
TranceptEVE: Combining Family-specific and Family-agnostic Models of Protein Sequences for Improved Fitness Prediction
Pascal Notin, Lood van Niekerk, Aaron W. Kollasch, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2022)
Open Access | Times Cited: 39
Mutations in IFN-γ signaling genes sensitize tumors to immune checkpoint blockade
Eric Song, Ryan D. Chow
Cancer Cell (2023) Vol. 41, Iss. 4, pp. 651-652
Open Access | Times Cited: 21
Enhancing missense variant pathogenicity prediction with protein language models using VariPred
Weining Lin, Jude Wells, Zeyuan Wang, et al.
Scientific Reports (2024) Vol. 14, Iss. 1
Open Access | Times Cited: 7
Machine learning methods for predicting protein structure from single sequences
Shaun M. Kandathil, Andy M. Lau, David T. Jones
Current Opinion in Structural Biology (2023) Vol. 81, pp. 102627-102627
Open Access | Times Cited: 16
Future prospects for human genetics and genomics in drug discovery
Maya Ghoussaini, Matthew R. Nelson, Ian Dunham
Current Opinion in Structural Biology (2023) Vol. 80, pp. 102568-102568
Open Access | Times Cited: 15
Decoding molecular mechanisms for loss of function variants in the human proteome
Matteo Cagiada, Nicolas Jonsson, Kresten Lindorff‐Larsen
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 5
GPN-MSA: an alignment-based DNA language model for genome-wide variant effect prediction
Gonzalo Benegas, Carlos Albors, Alan J. Aw, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 13
PRESCOTT: a population aware, epistatic and structural model accurately predicts missense effect
Mustafa Tekpinar, Laurent David, Thomas Henry, et al.
medRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 4
Higher throughput assays for understanding the pathogenicity of variants of unknown significance (VUS) in the RPE65 gene
Leila Azizzadeh Pormehr, Kannan V. Manian, Ha Eun Cho, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2025)
Open Access
AI approaches for the discovery and validation of drug targets
Aaron Wenteler, Claudia Cabrera, Wei Wei, et al.
Cambridge Prisms Precision Medicine (2024) Vol. 2
Open Access | Times Cited: 3
ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers
Pascal Notin, Ruben Weitzman, Debora S. Marks, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 8
Mixture of Experts Enable Efficient and Effective Protein Understanding and Design
Ning Sun, S. Zou, Tianhua Tao, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 2
VariPred: Enhancing Pathogenicity Prediction of Missense Variants Using Protein Language Models
Weining Lin, Jude Wells, Zeyuan Wang, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 6
Cellular and molecular mechanisms of aspartoacylase and its role in Canavan disease
Martin Grønbæk-Thygesen, Rasmus Hartmann‐Petersen
Cell & Bioscience (2024) Vol. 14, Iss. 1
Open Access | Times Cited: 1
Leveraging AI Advances and Online Tools for Structure‐Based Variant Analysis
Francisco J. Guzmán‐Vega, Ana C. González‐Álvarez, Karla A. Peña‐Guerra, et al.
Current Protocols (2023) Vol. 3, Iss. 8
Open Access | Times Cited: 2
The digital and analog worlds of protein engineering
Lada Nuzhna, Tess van Stekelenburg
Nature Biotechnology (2023) Vol. 41, Iss. 11, pp. 1513-1514
Closed Access | Times Cited: 2
Utilizing Semi-supervised Method in Predicting BRCA1 Pathogenicity Variants
Alam Ahmad Hidayat, Joko Pebrianto Trinugroho, Rudi Nirwantono, et al.
Procedia Computer Science (2023) Vol. 227, pp. 36-45
Open Access | Times Cited: 2
MetalPrognosis: a Biological Language Model-based Approach for Disease-Associated Mutations in Metal-Binding Site prediction
Runchang Jia, Zhijie He, Cong Wang, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 1
ESM-Scan - a tool to guide amino acid substitutions
Massimo G. Totaro, Uršula Vide, Regina Zausinger, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 1
ESM‐scan—A tool to guide amino acid substitutions
Massimo G. Totaro, Uršula Vide, Regina Zausinger, et al.
Protein Science (2024) Vol. 33, Iss. 12
Open Access
Orthogonal analysis of variants in APOE gene using in-silico approaches reveals novel disrupting variants
Chang Li, Ian Hou, Mingjia Ma, et al.
Frontiers in Bioinformatics (2023) Vol. 3
Open Access
VariPred: Enhancing Pathogenicity Prediction of Missense Variants Using Protein Language Models
Weining Lin, Jude Wells, Zeyuan Wang, et al.
Research Square (Research Square) (2023)
Open Access
ASCARIS: Positional feature annotation and protein structure-based representation of single amino acid variations
Fatma Cankara, Tunca Doğan
Computational and Structural Biotechnology Journal (2023) Vol. 21, pp. 4743-4758
Open Access
Cardiac arrest and a bifid T wave
Chan‐Hee Lee, Dong‐Gu Shin, Chun Ye, et al.
Heart Rhythm (2023) Vol. 20, Iss. 12, pp. 1791-1792
Closed Access
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