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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Transcriptional regulation and chromatin architecture maintenance are decoupled functions at the Sox2 locus
Tiegh Taylor, Natalia Sikorska, Virlana M. Shchuka, et al.
Genes & Development (2022) Vol. 36, Iss. 11-12, pp. 699-717
Open Access | Times Cited: 30

Showing 1-25 of 30 citing articles:

Enhancer–promoter interactions can bypass CTCF-mediated boundaries and contribute to phenotypic robustness
Shreeta Chakraborty, Nina Kopitchinski, Zhenyu Zuo, et al.
Nature Genetics (2023) Vol. 55, Iss. 2, pp. 280-290
Open Access | Times Cited: 74
Enhancer-gene specificity in development and disease
Tomás Pachano, Endika Haro, Álvaro Rada-Iglesias
Development (2022) Vol. 149, Iss. 11
Open Access | Times Cited: 43
Synthetic regulatory genomics uncovers enhancer context dependence at the Sox2 locus
Ran Brosh, Camila Coelho, André M. Ribeiro-dos-Santos, et al.
Molecular Cell (2023) Vol. 83, Iss. 7, pp. 1140-1152.e7
Open Access | Times Cited: 37
Enhancer cooperativity can compensate for loss of activity over large genomic distances
Henry Thomas, Songjie Feng, Felix Haslhofer, et al.
Molecular Cell (2024)
Open Access | Times Cited: 9
Synergy between cis-regulatory elements can render cohesin dispensable for distal enhancer function
Karissa Hansen, Annie S. Adachi, Luca Braccioli, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 8
Mechanisms of enhancer-promoter communication and chromosomal architecture in mammals and Drosophila
Olga Kyrchanova, Oleg V. Bylino, Pavel Georgiev
Frontiers in Genetics (2022) Vol. 13
Open Access | Times Cited: 25
Functional maps of a genomic locus reveal confinement of an enhancer by its target gene
M Eder, Christina J.I. Moene, Lise Dauban, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 6
Transcription processes compete with loop extrusion to homogenize promoter and enhancer dynamics
Angeliki Platania, Cathie Erb, Mariano Barbieri, et al.
Science Advances (2024) Vol. 10, Iss. 50
Open Access | Times Cited: 5
Competition between transcription and loop extrusion modulates promoter and enhancer dynamics
Angeliki Platania, Cathie Erb, Mariano Barbieri, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 13
A Sox2 Enhancer Cluster Regulates Region-Specific Neural Fates from Mouse Embryonic Stem Cells
Ian C. Tobias, Sakthi D. Moorthy, Virlana M. Shchuka, et al.
G3 Genes Genomes Genetics (2025)
Open Access
The dance of promoters and enhancers in gene regulation: fast or slow, entwined or distant?
Mariia Nazarova, Tom Sexton
Journal of Molecular Biology (2025), pp. 169223-169223
Open Access
Dissecting SOX2 expression and function reveals an association with multiple signaling pathways during embryonic development and in cancer progression
Niharika Niharika, Lina Ureka, Ankan Roy, et al.
Biochimica et Biophysica Acta (BBA) - Reviews on Cancer (2024) Vol. 1879, Iss. 5, pp. 189136-189136
Closed Access | Times Cited: 3
Enhancers: A Focus on Synthetic Biology and Correlated Gene Expression
Christopher H. Bohrer, Nadezda A. Fursova, Daniel R. Larson
ACS Synthetic Biology (2024)
Closed Access | Times Cited: 3
Transcription induces context-dependent remodeling of chromatin architecture during differentiation
Sanjay Chahar, Yousra Ben Zouari, Hossein Salari, et al.
PLoS Biology (2023) Vol. 21, Iss. 12, pp. e3002424-e3002424
Open Access | Times Cited: 8
Outward-oriented sites within clustered CTCF boundaries are key for intra-TAD chromatin interactions and gene regulation
Xiao Ge, Haiyan Huang, Han Ke-qi, et al.
Nature Communications (2023) Vol. 14, Iss. 1
Open Access | Times Cited: 7
Enhancer cooperativity can compensate for loss of activity over large genomic distances
Henry Thomas, Songjie Feng, Marie L. Huber, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Closed Access | Times Cited: 6
Topology regulatory elements: From shaping genome architecture to gene regulation
Liangfu Chen, Hannah K. Long
Current Opinion in Structural Biology (2023) Vol. 83, pp. 102723-102723
Open Access | Times Cited: 5
Unveiling the Machinery behind Chromosome Folding by Polymer Physics Modeling
Mattia Conte, Andrea Esposito, Francesca Vercellone, et al.
International Journal of Molecular Sciences (2023) Vol. 24, Iss. 4, pp. 3660-3660
Open Access | Times Cited: 4
EXTRA-seq: a genome-integrated extended massively parallel reporter assay to quantify enhancer-promoter communication
Judith F. Kribelbauer, Vincent Gardeux, Gerard Llimos, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 1
A Lightweight Framework For Chromatin Loop Detection at the Single‐Cell Level
Fuzhou Wang, Hamid Alinejad‐Rokny, Jiecong Lin, et al.
Advanced Science (2023) Vol. 10, Iss. 33
Open Access | Times Cited: 3
Synthetic regulatory genomics uncovers enhancer context dependence at the Sox2 locus
Ran Brosh, Camila Coelho, André M. Ribeiro-dos-Santos, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2022)
Open Access | Times Cited: 4
Context-dependent transcriptional remodeling of TADs during differentiation
Sanjay Chahar, Yousra Ben Zouari, Hossein Salari, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2022)
Open Access | Times Cited: 4
Competition between transcription and loop extrusion modulates promoter and enhancer dynamics
Tom Sexton, Angeliki Platania, Cathie Erb, et al.
Research Square (Research Square) (2023)
Open Access | Times Cited: 1
JUND plays a genome-wide role in the quiescent to contractile switch in the pregnant human myometrium
Nawrah Khader, Anna Dorogin, Oksana Shynlova, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access
THE CELLS ARE ALL-RIGHT: Regulation of the Lefty genes by separate enhancers in mouse embryonic stem cells
Tiegh Taylor, Hongyu Vicky Zhu, Sakthi D. Moorthy, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access
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