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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Targeted single-cell RNA sequencing of transcription factors enhances the identification of cell types and trajectories
Alexandra Pokhilko, Adam E. Handel, Fabiola Curion, et al.
Genome Research (2021) Vol. 31, Iss. 6, pp. 1069-1081
Open Access | Times Cited: 28

Showing 1-25 of 28 citing articles:

Identification of cell barcodes from long-read single-cell RNA-seq with BLAZE
Yupei You, Yair D. J. Prawer, Ricardo De Paoli‐Iseppi, et al.
Genome biology (2023) Vol. 24, Iss. 1
Open Access | Times Cited: 104
Advancements in single-cell RNA sequencing and spatial transcriptomics: transforming biomedical research
Getnet Molla Desta, Alemayehu Godana Birhanu
Acta Biochimica Polonica (2025) Vol. 72
Open Access | Times Cited: 6
Basal–epithelial subpopulations underlie and predict chemotherapy resistance in triple-negative breast cancer
Mohammed Inayatullah, Arun Mahesh, Arran Turnbull, et al.
EMBO Molecular Medicine (2024) Vol. 16, Iss. 4, pp. 823-853
Open Access | Times Cited: 5
Accurate estimation of molecular counts from amplicon sequence data with unique molecular identifiers
Xiyu Peng, Karin S. Dorman
Bioinformatics (2023) Vol. 39, Iss. 1
Open Access | Times Cited: 10
Enhancer regulatory networks globally connect non-coding breast cancer loci to cancer genes
Yihan Wang, Daniel Armendariz, Lei Wang, et al.
Genome biology (2025) Vol. 26, Iss. 1
Open Access
Application of scRNA-seq in Dental Research: Seeking Regenerative Clues From the Structure of Tooth and Periodontium in Physical or Pathological States
Xixi Miao, Yufen Huang, Kelsey Xingyun Ge, et al.
Frontiers in Bioscience-Landmark (2025) Vol. 30, Iss. 2
Open Access
Therapeutic and prognostic values of ferroptosis signature in glioblastoma
Reza Nedaeinia, Hassan Dianat‐Moghadam, Maedeh Movahednasab, et al.
International Immunopharmacology (2025) Vol. 155, pp. 114597-114597
Closed Access
Breaking enhancers to gain insights into developmental defects
Daniel Armendariz, Anjana Sundarrajan, Gary C. Hon
eLife (2023) Vol. 12
Open Access | Times Cited: 7
Complexities of mammalian transcriptome revealed by targeted RNA enrichment techniques
Dongyang Xu, Lu Tang, Philipp Kapranov
Trends in Genetics (2023) Vol. 39, Iss. 4, pp. 320-333
Closed Access | Times Cited: 4
Deciphering Tumor Cell Evolution in Cutaneous T-Cell Lymphomas: Distinct Differentiation Trajectories in Mycosis Fungoides and Sézary Syndrome
Tony Jiang, Simon Cao, Oleg Kruglov, et al.
Journal of Investigative Dermatology (2023) Vol. 144, Iss. 5, pp. 1088-1098
Closed Access | Times Cited: 4
RoCK and ROI: Single-cell transcriptomics with multiplexed enrichment of selected transcripts and region-specific sequencing
Giulia Moro, Izaskun Mallona, Joël Maillard, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 1
Identify Regulatory eQTLs by Multiome Sequencing in Prostate Single Cells
Yijun Tian, Lang Wu, Chang-Ching Huang, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 1
Identification of cell barcodes from long-read single-cell RNA-seq with BLAZE
Yupei You, Yair D. J. Prawer, Ricardo De Paoli‐Iseppi, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2022)
Open Access | Times Cited: 5
A CRISPR/Cas9-based enhancement of high-throughput single-cell transcriptomics
Amitabh C. Pandey, Jon Bezney, Dante DeAscanis, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2022)
Open Access | Times Cited: 5
Density-based detection of cell transition states to construct disparate and bifurcating trajectories
Tian Lan, György Hutvàgner, Xuan Zhang, et al.
Nucleic Acids Research (2022) Vol. 50, Iss. 21, pp. e122-e122
Open Access | Times Cited: 4
Cross-site reproducibility of human cortical organoids reveals consistent cell type composition and architecture
Madison R. Glass, Elisa A. Waxman, Satoshi Yamashita, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 2
Enhancer regulatory networks globally connect non-coding breast cancer loci to cancer genes
Yihan Wang, Daniel Armendariz, Lei Wang, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 2
Phenotypic and Transcriptomic Responses to Stress Differ According to Population Geography in an Invasive Species
Pierre Marin, Angelo Jaquet, Justine Picarle, et al.
Genome Biology and Evolution (2021) Vol. 13, Iss. 9
Open Access | Times Cited: 5
Dissection and Integration of Bursty Transcriptional Dynamics for Complex Systems
Cheng Gao, Suriyanarayanan Vaikuntanathan, Samantha J. Riesenfeld
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 1
Neoantigen identification: Technological advances and challenges
Ting Pu, Allyson Peddle, Jingjing Zhu, et al.
Methods in cell biology (2023), pp. 265-302
Closed Access | Times Cited: 1
Highlights of how single-cell analyses are illuminating differentiation and disease in the gastric corpus
Mahliyah Adkins-Threats, Yang‐Zhe Huang, Jason C. Mills
AJP Gastrointestinal and Liver Physiology (2024) Vol. 326, Iss. 3, pp. G205-G215
Closed Access
Long-read single-cell RNA sequencing enables the study of cancer subclone-specific genotype and phenotype in chronic lymphocytic leukemia
Gage S. Black, Xiaomeng Huang, Yi Qiao, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access
Study of the RNA splicing kinetics via in vivo 5-ethynyl uridine labelling
Anastasiia K. Bolikhova, Andrey Buyan, Sofia S. Mariasina, et al.
RNA (2024) Vol. 30, Iss. 10, pp. 1356-1373
Closed Access
InTraSeq: A Multimodal Assay that Uncovers New Single-Cell Biology and Regulatory Mechanisms
Sean A. Beausoleil, Majd Ariss, Linglin Huang, et al.
Research Square (Research Square) (2024)
Open Access
Challenges and opportunities in the use of transcriptomic characterization of human iPSC-derived BBB models
Sara Wellens, Fabien Gosselet, Maxime Culot
Toxicology in Vitro (2022) Vol. 84, pp. 105424-105424
Open Access | Times Cited: 1
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