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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

GeneMark-ETP significantly improves the accuracy of automatic annotation of large eukaryotic genomes
Tomáš Brůna, Alexandre Lomsadze, Mark Borodovsky
Genome Research (2024) Vol. 34, Iss. 5, pp. 757-768
Open Access | Times Cited: 24

Showing 24 citing articles:

BRAKER3: Fully automated genome annotation using RNA-seq and protein evidence with GeneMark-ETP, AUGUSTUS, and TSEBRA
Lars Gabriel, Tomáš Brůna, Katharina J. Hoff, et al.
Genome Research (2024) Vol. 34, Iss. 5, pp. 769-777
Open Access | Times Cited: 112
Chromosome-scale and haplotype-resolved genome assembly of Populus trichocarpa
Wentao Gao, Sui Wang, Tao Jiang, et al.
Horticulture Research (2025) Vol. 12, Iss. 4
Open Access
A chromosome-level, haplotype-resolved genome assembly and annotation for the Eurasian minnow (Leuciscidae: Phoxinus phoxinus) provide evidence of haplotype diversity
Temitope Opeyemi Oriowo, Ioannis Chrysostomakis, Sebastián Martín, et al.
GigaScience (2025) Vol. 14
Open Access
A Near Complete Genome Assembly of the Oshima Cherry Cerasus speciosa
Kazumichi Fujiwara, Atsushi Toyoda, Bhim B. Biswa, et al.
Scientific Data (2025) Vol. 12, Iss. 1
Open Access
First whole genome assembly of Python regius (ball python), a model of extreme physiological and metabolic plasticity
Dakota R. Hunt, Holly Allen, Thomas G. Martin, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2025)
Open Access
Chromosome-level genome assembly for the ecologically and economically important alga Saccharina japonica
Xiaodong Li, Yulong Li, Chenhui Zhong, et al.
Scientific Data (2025) Vol. 12, Iss. 1
Open Access
Chromosome-level genome assembly of soybean aphid
Sizhe Qiu, Ningning Wu, Xiaodong Sun, et al.
Scientific Data (2025) Vol. 12, Iss. 1
Open Access
Vanderwaltozyma urihicola sp. nov., a yeast species isolated from rotting wood and beetles in a Brazilian Amazonian rainforest biome
Flávia B. M. Alvarenga, Katharina O. Barros, Thiago Mafra Batista, et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2025) Vol. 75, Iss. 3
Closed Access
A chromosome-level genome of the King penguin (Aptenodytes patagonicus): an emerging model-in-the-wild for studying evolution
Josephine R. Paris, Flávia A. N. Fernandes, Camilla A. Santos, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2025)
Open Access
An chromosome-level haplotype-resolved genome assembly and annotation of pitaya (Selenicereus polyrhizus)
Juncheng Li, Wenlong Luo, Biao Jiang, et al.
Scientific Data (2025) Vol. 12, Iss. 1
Open Access
Phased high-quality genome of the gymnosperm Himalayan Yew assists in paclitaxel pathway exploration
Zhenzhu Li, Hang Zong, Xiaonan Liu, et al.
GigaScience (2025) Vol. 14
Open Access
Diploid chromosome-level genome assembly and annotation for Lycorma delicatula
Anthony A. Snead, Meng Fang, Nicolas Largotta, et al.
Scientific Data (2025) Vol. 12, Iss. 1
Open Access
Adaptation repeatedly uses complex structural genomic variation
Zachariah Gompert, Jeffrey L. Feder, Thomas L. Parchman, et al.
Science (2025) Vol. 388, Iss. 6744
Closed Access
Annotation of 200 Insect Genomes with BRAKER for Consistent Comparisons across Species
Stepan Saenko, Katharina J. Hoff, Mario Stanke
bioRxiv (Cold Spring Harbor Laboratory) (2025)
Open Access
Highly accurate ab initio gene annotation with ANNEVO
Kai Ye, Pengyu Zhang, Tun Xu, et al.
Research Square (Research Square) (2025)
Closed Access
A telomere-to-telomere gap-free reference genome assembly of avocado provides useful resources for identifying genes related to fatty acid biosynthesis and disease resistance
Tianyu Yang, Yifan Cai, Tianping Huang, et al.
Horticulture Research (2024) Vol. 11, Iss. 7
Open Access | Times Cited: 3
De novogenome sequence assembly of the RNAi-tractable endosymbiosis model systemParamecium bursaria186b reveals factors shaping intron repertoire
Guy Leonard, Benjamin H. Jenkins, Fiona R. Savory, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 1
Efficient assembly of plant genomes: A case study with evolutionary implications inRanunculus(Ranunculaceae)
Kevin Karbstein, Nancy Choudhary, Ting Xie, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 3
Chromosome-Level Genome Assembly of the Viviparous Eelpout Zoarces viviparus
Nico Fuhrmann, Marie V. Brasseur, Christina E. Bakowski, et al.
Genome Biology and Evolution (2024) Vol. 16, Iss. 8
Open Access
Chromosome-level genome assembly of the planthopper Nilaparvata muiri
C.Y. Wang, Ju Luo, Aiying Wang, et al.
Scientific Data (2024) Vol. 11, Iss. 1
Open Access
De Novo Genome Assembly and Phylogenetic Analysis of Cirsium nipponicum
Bae Young Choi, Jaewook Kim, Hyeonseon Park, et al.
Genes (2024) Vol. 15, Iss. 10, pp. 1269-1269
Open Access
Chromosome-level genome assembly and annotation of Clanis bilineata tsingtauica Mell (Lepidoptera: Sphingidae)
Yulu Yan, Ke Zhao, Longwei Yang, et al.
Scientific Data (2024) Vol. 11, Iss. 1
Open Access
The first de novo HiFi genome assemblies for three clownfish-hosting sea anemone species (Anthozoa: Actiniaria)
Aurélien De Jode, Benjamin M. Titus
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access
Unveiling the catabolic biodegradation of pymetrozine in Pseudomonas guariconensis strain BYT-5 through genomics studies
Mingliang Zhang, Yali Liu, Qian Li, et al.
International Biodeterioration & Biodegradation (2024) Vol. 198, pp. 105991-105991
Closed Access
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