Open Access Helper

OpenAlex Citation Counts

OpenAlex Citations Logo

OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Bioinformatic processing of RAD‐seq data dramatically impacts downstream population genetic inference
Aaron B. A. Shafer, Claire Peart, Sergio Tusso, et al.
Methods in Ecology and Evolution (2016) Vol. 8, Iss. 8, pp. 907-917
Open Access | Times Cited: 338

Showing 1-25 of 338 citing articles:

ipyrad: Interactive assembly and analysis of RADseq datasets
Deren A. R. Eaton, Isaac Overcast
Bioinformatics (2019) Vol. 36, Iss. 8, pp. 2592-2594
Open Access | Times Cited: 692
Lost in parameter space: a road map for stacks
Josephine R. Paris, Jamie R. Stevens, Julian Catchen
Methods in Ecology and Evolution (2017) Vol. 8, Iss. 10, pp. 1360-1373
Open Access | Times Cited: 572
Deriving genotypes from RAD-seq short-read data using Stacks
Nicolas C. Rochette, Julian Catchen
Nature Protocols (2017) Vol. 12, Iss. 12, pp. 2640-2659
Closed Access | Times Cited: 452
Minor allele frequency thresholds strongly affect population structure inference with genomic data sets
Ethan Linck, C.J. Battey
Molecular Ecology Resources (2019) Vol. 19, Iss. 3, pp. 639-647
Open Access | Times Cited: 334
Whole-genome sequencing approaches for conservation biology: Advantages, limitations and practical recommendations
Angela P. Fuentes‐Pardo, Daniel E. Ruzzante
Molecular Ecology (2017) Vol. 26, Iss. 20, pp. 5369-5406
Open Access | Times Cited: 288
The presence and impact of reference bias on population genomic studies of prehistoric human populations
Torsten Günther, Carl Nettelblad
PLoS Genetics (2019) Vol. 15, Iss. 7, pp. e1008302-e1008302
Open Access | Times Cited: 189
Global genetic diversity status and trends: towards a suite of Essential Biodiversity Variables (EBVs) for genetic composition
Sean Hoban, Frederick I. Archer, Laura D. Bertola, et al.
Biological reviews/Biological reviews of the Cambridge Philosophical Society (2022) Vol. 97, Iss. 4, pp. 1511-1538
Open Access | Times Cited: 163
Conservation and the Genomics of Populations
Fred W. Allendorf, W. Chris Funk, Sally N. Aitken, et al.
Oxford University Press eBooks (2022)
Closed Access | Times Cited: 116
Opportunities and challenges of macrogenetic studies
Deborah M. Leigh, Charles B. van Rees, Katie L. Millette, et al.
Nature Reviews Genetics (2021) Vol. 22, Iss. 12, pp. 791-807
Closed Access | Times Cited: 107
Phylogenomics and the flowering plant tree of life
Cen Guo, Yang Luo, Lian‐Ming Gao, et al.
Journal of Integrative Plant Biology (2022) Vol. 65, Iss. 2, pp. 299-323
Open Access | Times Cited: 78
Adapterama III: Quadruple-indexed, double/triple-enzyme RADseq libraries (2RAD/3RAD)
Natalia J. Bayona‐Vásquez, Travis C. Glenn, Troy J. Kieran, et al.
PeerJ (2019) Vol. 7, pp. e7724-e7724
Open Access | Times Cited: 143
Double‐digest RAD sequencing outperforms microsatellite loci at assigning paternity and estimating relatedness: A proof of concept in a highly promiscuous bird
Derrick J. Thrasher, Bronwyn G. Butcher, Leonardo Campagna, et al.
Molecular Ecology Resources (2018) Vol. 18, Iss. 5, pp. 953-965
Open Access | Times Cited: 130
The Value of Reference Genomes in the Conservation of Threatened Species
Parice Brandies, Emma Peel, Carolyn J. Hogg, et al.
Genes (2019) Vol. 10, Iss. 11, pp. 846-846
Open Access | Times Cited: 130
Recent advances in conservation and population genomics data analysis
Sarah A. Hendricks, Eric C. Anderson, Tiago Antão, et al.
Evolutionary Applications (2018) Vol. 11, Iss. 8, pp. 1197-1211
Open Access | Times Cited: 125
Hybrid speciation leads to novel male secondary sexual ornamentation of an Amazonian bird
Alfredo O. Barrera‐Guzmán, Alexandre Luis Padovan Aleixo, Matthew D. Shawkey, et al.
Proceedings of the National Academy of Sciences (2017) Vol. 115, Iss. 2
Open Access | Times Cited: 103
Population Genomics: Advancing Understanding of Nature
Gordon Luikart, Marty Kardos, Brian K. Hand, et al.
Population genomics (2018), pp. 3-79
Closed Access | Times Cited: 97
Nonequivalent lethal equivalents: Models and inbreeding metrics for unbiased estimation of inbreeding load
Pirmin Nietlisbach, Stefanie Muff, Jane M. Reid, et al.
Evolutionary Applications (2018) Vol. 12, Iss. 2, pp. 266-279
Open Access | Times Cited: 93
From reference genomes to population genomics: comparing three reference-aligned reduced-representation sequencing pipelines in two wildlife species
Belinda Wright, Katherine A. Farquharson, Elspeth A. McLennan, et al.
BMC Genomics (2019) Vol. 20, Iss. 1
Open Access | Times Cited: 79
Commonly used Hardy–Weinberg equilibrium filtering schemes impact population structure inferences using RADseq data
William S. Pearman, Lara Urban, Alana Alexander
Molecular Ecology Resources (2022) Vol. 22, Iss. 7, pp. 2599-2613
Open Access | Times Cited: 57
RADSex: A computational workflow to study sex determination using restriction site‐associated DNA sequencing data
Romain Feron, Qiaowei Pan, Ming Wen, et al.
Molecular Ecology Resources (2021) Vol. 21, Iss. 5, pp. 1715-1731
Open Access | Times Cited: 56
Next-generation data filtering in the genomics era
William Hemstrom, Jared A. Grummer, Gordon Luikart, et al.
Nature Reviews Genetics (2024)
Closed Access | Times Cited: 15
Fine-tuning GBS data with comparison of reference and mock genome approaches for advancing genomic selection in less studied farmed species
Daniel Fischer, Miika Tapio, Oliver Bitz, et al.
BMC Genomics (2025) Vol. 26, Iss. 1
Open Access | Times Cited: 1
Genomewide patterns of variation in genetic diversity are shared among populations, species and higher‐order taxa
Nagarjun Vijay, Matthias H. Weissensteiner, Reto Burri, et al.
Molecular Ecology (2017) Vol. 26, Iss. 16, pp. 4284-4295
Open Access | Times Cited: 87
Resolving Recent Plant Radiations: Power and Robustness of Genotyping-by-Sequencing
Mario Fernández‐Mazuecos, Greg Mellers, Beatriz Vigalondo, et al.
Systematic Biology (2017) Vol. 67, Iss. 2, pp. 250-268
Open Access | Times Cited: 81
Estimation of contemporary effective population size and population declines using RAD sequence data
Schyler O. Nunziata, David W. Weisrock
Heredity (2017) Vol. 120, Iss. 3, pp. 196-207
Open Access | Times Cited: 76
Page 1 - Next Page

Scroll to top