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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Genome-wide kinetic properties of transcriptional bursting in mouse embryonic stem cells
Hiroshi Ochiai, Tetsutaro Hayashi, Mana Umeda, et al.
Science Advances (2020) Vol. 6, Iss. 25
Open Access | Times Cited: 97

Showing 1-25 of 97 citing articles:

Nebulosa recovers single-cell gene expression signals by kernel density estimation
José Alquicira-Hernández, Joseph E. Powell
Bioinformatics (2021) Vol. 37, Iss. 16, pp. 2485-2487
Open Access | Times Cited: 239
Single-cell nascent RNA sequencing unveils coordinated global transcription
Dig Bijay Mahat, Nathaniel D. Tippens, Jorge D. Martin-Rufino, et al.
Nature (2024) Vol. 631, Iss. 8019, pp. 216-223
Open Access | Times Cited: 26
Real-time visualization of reconstituted transcription reveals RNA polymerase II activation mechanisms at single promoters
Megan Palacio, Dylan J. Taatjes
bioRxiv (Cold Spring Harbor Laboratory) (2025)
Open Access | Times Cited: 3
Identification of molecular determinants of gene-specific bursting patterns by high-throughput imaging screens
Varun Sood, Ronald J. Holewinski, Þorkell Andrésson, et al.
Molecular Cell (2025)
Closed Access | Times Cited: 2
PRC1 drives Polycomb-mediated gene repression by controlling transcription initiation and burst frequency
Paula Dobrinić, Aleksander Szczurek, Robert J. Klose
Nature Structural & Molecular Biology (2021) Vol. 28, Iss. 10, pp. 811-824
Open Access | Times Cited: 80
The minimal intrinsic stochasticity of constitutively expressed eukaryotic genes is sub-Poissonian
Douglas E. Weidemann, James Holehouse, Abhyudai Singh, et al.
Science Advances (2023) Vol. 9, Iss. 32
Open Access | Times Cited: 29
The Polycomb system sustains promoters in a deep OFF state by limiting pre-initiation complex formation to counteract transcription
Aleksander Szczurek, Emilia Dimitrova, Jessica R. Kelley, et al.
Nature Cell Biology (2024)
Open Access | Times Cited: 12
Priestia megaterium cells are primed for surviving lethal doses of antibiotics and chemical stress
Manisha Guha, Abhyudai Singh, Nicholas C. Butzin
Communications Biology (2025) Vol. 8, Iss. 1
Open Access | Times Cited: 1
Live imaging of transcription sites using an elongating RNA polymerase II–specific probe
Satoshi Uchino, Yuma Ito, Yuko Sato, et al.
The Journal of Cell Biology (2021) Vol. 221, Iss. 2
Open Access | Times Cited: 43
Genome-wide inference reveals that feedback regulations constrain promoter-dependent transcriptional burst kinetics
Songhao Luo, Zihao Wang, Zhenquan Zhang, et al.
Nucleic Acids Research (2022) Vol. 51, Iss. 1, pp. 68-83
Open Access | Times Cited: 32
Probing transient memory of cellular states using single-cell lineages
Abhyudai Singh, Michael Saint-Antoine
Frontiers in Microbiology (2023) Vol. 13
Open Access | Times Cited: 20
Inferring transcriptional bursting kinetics from single-cell snapshot data using a generalized telegraph model
Songhao Luo, Zhenquan Zhang, Zihao Wang, et al.
Royal Society Open Science (2023) Vol. 10, Iss. 4
Open Access | Times Cited: 20
Power-law behavior of transcriptional bursting regulated by enhancer–promoter communication
Zihao Wang, Zhenquan Zhang, Songhao Luo, et al.
Genome Research (2024) Vol. 34, Iss. 1, pp. 106-118
Open Access | Times Cited: 8
Transcription-coupled changes in genomic region proximities during transcriptional bursting
Hiroaki Ohishi, Soya Shinkai, Hitoshi Owada, et al.
Science Advances (2024) Vol. 10, Iss. 49
Open Access | Times Cited: 8
Protein translation rate determines neocortical neuron fate
Екатерина Борисова, Andrew G. Newman, Marta Couce Iglesias, et al.
Nature Communications (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 7
Decoding the dynamics of multilayered stochastic antiviral IFN-I responses
Laura C. Van Eyndhoven, Abhyudai Singh, Jurjen Tel
Trends in Immunology (2021) Vol. 42, Iss. 9, pp. 824-839
Open Access | Times Cited: 38
Transcription factor binding kinetics and transcriptional bursting: What do we really know?
Matteo Mazzocca, Emanuele Colombo, Andrea Callegari, et al.
Current Opinion in Structural Biology (2021) Vol. 71, pp. 239-248
Closed Access | Times Cited: 37
STREAMING-tag system reveals spatiotemporal relationships between transcriptional regulatory factors and transcriptional activity
Hiroaki Ohishi, Seiru Shimada, Satoshi Uchino, et al.
Nature Communications (2022) Vol. 13, Iss. 1
Open Access | Times Cited: 28
3D chromatin architecture, BRD4, and Mediator have distinct roles in regulating genome-wide transcriptional bursting and gene network
Paweł Trzaskoma, Seolkyoung Jung, Aleksandra Pękowska, et al.
Science Advances (2024) Vol. 10, Iss. 32
Open Access | Times Cited: 6
Compound bursting behaviors in a forced Mathieu-van der Pol-Duffing system
Xindong Ma, Daixian Xia, Wen‐An Jiang, et al.
Chaos Solitons & Fractals (2021) Vol. 147, pp. 110967-110967
Closed Access | Times Cited: 28
Mechanical stimulation from the surrounding tissue activates mitochondrial energy metabolism in Drosophila differentiating germ cells
Zongheng Wang, Wenjing Zhao, Christian A. Combs, et al.
Developmental Cell (2023) Vol. 58, Iss. 21, pp. 2249-2260.e9
Open Access | Times Cited: 13
Dynamic modulation of enhancer responsiveness by core promoter elements in living Drosophila embryos
Moe Yokoshi, Koji Kawasaki, Manuel Cambón, et al.
Nucleic Acids Research (2021) Vol. 50, Iss. 1, pp. 92-107
Open Access | Times Cited: 24
Single-cell analyses reveal increased gene expression variability in human neurodevelopmental conditions
Suraj Upadhya, Jenny A. Klein, Anna Nathanson, et al.
The American Journal of Human Genetics (2025)
Open Access
Mouse promoters are characterised by low occupancy and high turnover of RNA polymerase II
Kasit Chatsirisupachai, Christina J.I. Moene, Rozemarijn Kleinendorst, et al.
Molecular Systems Biology (2025)
Open Access
Regulation of RNA polymerase II transcription through re-initiation and bursting
Michael Nagel, Dylan J. Taatjes
Molecular Cell (2025) Vol. 85, Iss. 10, pp. 1907-1919
Closed Access
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