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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Joint profiling of chromatin accessibility and gene expression in thousands of single cells
Junyue Cao, Darren A. Cusanovich, Vijay Ramani, et al.
Science (2018) Vol. 361, Iss. 6409, pp. 1380-1385
Open Access | Times Cited: 838

Showing 1-25 of 838 citing articles:

Comprehensive Integration of Single-Cell Data
Tim Stuart, Andrew Butler, Paul Hoffman, et al.
Cell (2019) Vol. 177, Iss. 7, pp. 1888-1902.e21
Open Access | Times Cited: 12962
Integrated analysis of multimodal single-cell data
Yuhan Hao, Stephanie Hao, Erica Andersen‐Nissen, et al.
Cell (2021) Vol. 184, Iss. 13, pp. 3573-3587.e29
Open Access | Times Cited: 10491
The single-cell transcriptional landscape of mammalian organogenesis
Junyue Cao, Malte Spielmann, Xiaojie Qiu, et al.
Nature (2019) Vol. 566, Iss. 7745, pp. 496-502
Open Access | Times Cited: 3353
Chromatin accessibility and the regulatory epigenome
Sandy Klemm, Zohar Shipony, William J. Greenleaf
Nature Reviews Genetics (2019) Vol. 20, Iss. 4, pp. 207-220
Closed Access | Times Cited: 1467
A comparison of single-cell trajectory inference methods
Wouter Saelens, Robrecht Cannoodt, Helena Todorov, et al.
Nature Biotechnology (2019) Vol. 37, Iss. 5, pp. 547-554
Open Access | Times Cited: 1376
A rapid and robust method for single cell chromatin accessibility profiling
Xi Chen, Ricardo J. Miragaia, Kedar Nath Natarajan, et al.
Nature Communications (2018) Vol. 9, Iss. 1
Open Access | Times Cited: 1305
Fibrosis: from mechanisms to medicines
Neil C. Henderson, Florian Rieder, Thomas A. Wynn
Nature (2020) Vol. 587, Iss. 7835, pp. 555-566
Open Access | Times Cited: 1252
Integrative single-cell analysis
Tim Stuart, Rahul Satija
Nature Reviews Genetics (2019) Vol. 20, Iss. 5, pp. 257-272
Closed Access | Times Cited: 1159
Single-cell chromatin state analysis with Signac
Tim Stuart, Avi Srivastava, Shaista Madad, et al.
Nature Methods (2021) Vol. 18, Iss. 11, pp. 1333-1341
Open Access | Times Cited: 1096
Eleven grand challenges in single-cell data science
David Lähnemann, Johannes Köster, Ewa Szczurek, et al.
Genome biology (2020) Vol. 21, Iss. 1
Open Access | Times Cited: 1045
Single-cell transcriptional diversity is a hallmark of developmental potential
Gunsagar S. Gulati, Shaheen S. Sikandar, Daniel J. Wesche, et al.
Science (2020) Vol. 367, Iss. 6476, pp. 405-411
Open Access | Times Cited: 956
Chromatin Potential Identified by Shared Single-Cell Profiling of RNA and Chromatin
Sai Ma, Bing Zhang, Lindsay M. LaFave, et al.
Cell (2020) Vol. 183, Iss. 4, pp. 1103-1116.e20
Open Access | Times Cited: 853
DNA methylation aging clocks: challenges and recommendations
Christopher G. Bell, Robert Lowe, Peter D. Adams, et al.
Genome biology (2019) Vol. 20, Iss. 1
Open Access | Times Cited: 793
Orchestrating single-cell analysis with Bioconductor
Robert A. Amezquita, Aaron T. L. Lun, Étienne Becht, et al.
Nature Methods (2019) Vol. 17, Iss. 2, pp. 137-145
Open Access | Times Cited: 740
High-throughput sequencing of the transcriptome and chromatin accessibility in the same cell
Song Chen, Blue B. Lake, Kun Zhang
Nature Biotechnology (2019) Vol. 37, Iss. 12, pp. 1452-1457
Open Access | Times Cited: 700
CD8+ T cell differentiation and dysfunction in cancer
Mary Philip, Andrea Schietinger
Nature reviews. Immunology (2021) Vol. 22, Iss. 4, pp. 209-223
Open Access | Times Cited: 695
Methods and applications for single-cell and spatial multi-omics
Katy Vandereyken, Alejandro Sifrim, Bernard Thienpont, et al.
Nature Reviews Genetics (2023) Vol. 24, Iss. 8, pp. 494-515
Open Access | Times Cited: 626
A human cell atlas of fetal gene expression
Junyue Cao, Diana R. O’Day, Hannah A. Pliner, et al.
Science (2020) Vol. 370, Iss. 6518
Open Access | Times Cited: 620
MOFA+: a statistical framework for comprehensive integration of multi-modal single-cell data
Ricard Argelaguet, Damien Arnol, Danila Bredikhin, et al.
Genome biology (2020) Vol. 21, Iss. 1
Open Access | Times Cited: 544
Best practices for single-cell analysis across modalities
Lukas Heumos, Anna C. Schaar, Christopher Lance, et al.
Nature Reviews Genetics (2023) Vol. 24, Iss. 8, pp. 550-572
Open Access | Times Cited: 535
Differential abundance testing on single-cell data using k-nearest neighbor graphs
Emma Dann, Neil C. Henderson, Sarah A. Teichmann, et al.
Nature Biotechnology (2021) Vol. 40, Iss. 2, pp. 245-253
Open Access | Times Cited: 493
The technological landscape and applications of single-cell multi-omics
Alev Baysoy, Zhiliang Bai, Rahul Satija, et al.
Nature Reviews Molecular Cell Biology (2023) Vol. 24, Iss. 10, pp. 695-713
Open Access | Times Cited: 461
Multiplexed detection of proteins, transcriptomes, clonotypes and CRISPR perturbations in single cells
Eleni P. Mimitou, Anthony Cheng, Antonino Montalbano, et al.
Nature Methods (2019) Vol. 16, Iss. 5, pp. 409-412
Open Access | Times Cited: 445
Single-cell multiomics: technologies and data analysis methods
Jeongwoo Lee, Do Young Hyeon, Daehee Hwang
Experimental & Molecular Medicine (2020) Vol. 52, Iss. 9, pp. 1428-1442
Open Access | Times Cited: 431
Droplet-based combinatorial indexing for massive-scale single-cell chromatin accessibility
Caleb A. Lareau, Fabiana M. Duarte, Jennifer Chew, et al.
Nature Biotechnology (2019) Vol. 37, Iss. 8, pp. 916-924
Open Access | Times Cited: 410
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