OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Understanding the causes of errors in eukaryotic protein-coding gene prediction: a case study of primate proteomes
Corentin Meyer, Nicolas Scalzitti, Anne Jeannin‐Girardon, et al.
BMC Bioinformatics (2020) Vol. 21, Iss. 1
Open Access | Times Cited: 22

Showing 22 citing articles:

Welcome to the big leaves: Best practices for improving genome annotation in non‐model plant genomes
Vidya S Vuruputoor, Daniel Monyak, Karl C. Fetter, et al.
Applications in Plant Sciences (2023) Vol. 11, Iss. 4
Open Access | Times Cited: 30

Toward a comprehensive profiling of alternative splicing proteoform structures, interactions and functions
Élodie Laine, María I. Freiberger
Current Opinion in Structural Biology (2025) Vol. 90, pp. 102979-102979
Open Access | Times Cited: 1

Spliceator: multi-species splice site prediction using convolutional neural networks
Nicolas Scalzitti, Arnaud Kress, Romain Orhand, et al.
BMC Bioinformatics (2021) Vol. 22, Iss. 1
Open Access | Times Cited: 49

The nature and distribution of putative non-functional alleles suggest only two independent events at the origins of Astyanax mexicanus cavefish populations
Maxime Policarpo, Laurent Legendre, Isabelle Germon, et al.
BMC Ecology and Evolution (2024) Vol. 24, Iss. 1
Open Access | Times Cited: 4

Deep proteome coverage advances knowledge of Treponema pallidum protein expression profiles during infection
Simon Houston, Alloysius Gomez, Andrew Geppert, et al.
Scientific Reports (2023) Vol. 13, Iss. 1
Open Access | Times Cited: 9

Functional characterization of prokaryotic dark matter: the road so far and what lies ahead
Pedro Escudeiro, Christopher S. Henry, Ricardo P.M. Dias
Current Research in Microbial Sciences (2022) Vol. 3, pp. 100159-100159
Open Access | Times Cited: 14

Real or fake? Measuring the impact of protein annotation errors on estimates of domain gain and loss events
Arnaud Kress, Olivier Poch, Odile Lecompte, et al.
Frontiers in Bioinformatics (2023) Vol. 3
Open Access | Times Cited: 6

Deep Splicer: A CNN Model for Splice Site Prediction in Genetic Sequences
Elisa Fernández-Castillo, Liliana Ibeth Barbosa-Santillán, Luis Eduardo Falcón-Morales, et al.
Genes (2022) Vol. 13, Iss. 5, pp. 907-907
Open Access | Times Cited: 9

CeGAL: Redefining a Widespread Fungal-Specific Transcription Factor Family Using an In Silico Error-Tracking Approach
Claudine Mayer, Arthur Vogt, Tuba Uslu, et al.
Journal of Fungi (2023) Vol. 9, Iss. 4, pp. 424-424
Open Access | Times Cited: 4

The genome of the toxic invasive species Heracleum sosnowskyi carries an increased number of genes despite absence of recent whole‐genome duplications
Mikhail I. Schelkunov, Victoria Shtratnikova, Anna V. Klepikova, et al.
The Plant Journal (2023) Vol. 117, Iss. 2, pp. 449-463
Open Access | Times Cited: 4

Pipeline for transferring annotations between proteins beyond globular domains
Elizabeth Martínez‐Pérez, Mátyás Pajkos, Silvio C. E. Tosatto, et al.
Protein Science (2023) Vol. 32, Iss. 7
Open Access | Times Cited: 3

Fishing for a reelGene: evaluating gene models with evolution and machine learning
Aimee J Schulz, Jingjing Zhai, Taylor AuBuchon‐Elder, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 3

Identifying genes with conserved splicing structure and orthologous isoforms in human, mouse and dog
Nicolas Guillaudeux, Catherine Belleannée, Samuel Blanquart
BMC Genomics (2022) Vol. 23, Iss. 1
Open Access | Times Cited: 5

Revised eutherian gene collections
Marko Premzl
BMC Genomic Data (2022) Vol. 23, Iss. 1
Open Access | Times Cited: 5

Welcome to the big leaves: best practices for improving genome annotation in non-model plant genomes
Vidya S Vuruputoor, Daniel Monyak, Karl C. Fetter, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2022)
Open Access | Times Cited: 5

De-MISTED: Image-based classification of erroneous multiple sequence alignments using convolutional neural networks
Hiba Khodji, Pierre Collet, Julie Thompson, et al.
Applied Intelligence (2023) Vol. 53, Iss. 15, pp. 18806-18820
Open Access | Times Cited: 2

toGC: a pipeline to correct gene model for functional excavation of dark GPCRs in Phytophthora sojae1
Min Qiu, Yan Chun, Huaibo Li, et al.
Journal of Integrative Agriculture (2024)
Open Access

In-silico characterization of Δ4 and Δ5 desaturases in Symbiodinium microadriaticum and Perkinsus marinus, symbiont and parasitic organisms’ similarities
Hernán Vera-Villalobos, Yashira Miranda-Peña, Francisco Fuentes-Santander, et al.
Marine Biology (2023) Vol. 171, Iss. 1
Closed Access | Times Cited: 1

Scope of Proteogenomic Analysis for Indian Sandalwood (Santalum Album)
Pratigya Subba, Thottethodi Subrahmanya Keshava Prasad
Compendium of plant genomes (2022), pp. 89-97
Closed Access

MERLIN: Identifying Inaccuracies in Multiple Sequence Alignments Using Object Detection
Hiba Khodji, Lucille Herbay, Pierre Collet, et al.
IFIP advances in information and communication technology (2022), pp. 192-203
Closed Access

Pipeline for transferring annotations between proteins beyond globular domains
Elizabeth Martínez‐Pérez, Mátyás Pajkos, Silvio C. E. Tosatto, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2022)
Open Access

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