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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Spliceator: multi-species splice site prediction using convolutional neural networks
Nicolas Scalzitti, Arnaud Kress, Romain Orhand, et al.
BMC Bioinformatics (2021) Vol. 22, Iss. 1
Open Access | Times Cited: 49

Showing 1-25 of 49 citing articles:

Whole genome sequencing in clinical practice
Frederik Otzen Bagger, Line Borgwardt, Andreas Sand Jespersen, et al.
BMC Medical Genomics (2024) Vol. 17, Iss. 1
Open Access | Times Cited: 42
Self-supervised learning on millions of primary RNA sequences from 72 vertebrates improves sequence-based RNA splicing prediction
Ken Chen, Yue Zhou, Maolin Ding, et al.
Briefings in Bioinformatics (2024) Vol. 25, Iss. 3
Open Access | Times Cited: 17
A foundational large language model for edible plant genomes
Javier Mendoza‐Revilla, Evan Trop, Liam Gonzalez, et al.
Communications Biology (2024) Vol. 7, Iss. 1
Open Access | Times Cited: 12
A de novo ARIH2 gene mutation was detected in a patient with autism spectrum disorders and intellectual disability
Mirella Vinci, Simone Treccarichi, Rosanna Galati Rando, et al.
Scientific Reports (2024) Vol. 14, Iss. 1
Open Access | Times Cited: 11
Toward a comprehensive profiling of alternative splicing proteoform structures, interactions and functions
Élodie Laine, María I. Freiberger
Current Opinion in Structural Biology (2025) Vol. 90, pp. 102979-102979
Open Access | Times Cited: 1
Transcriptional and post-transcriptional controls for tuning gene expression in plants
Vivian Zhong, Bella N. Archibald, Jennifer A. N. Brophy
Current Opinion in Plant Biology (2022) Vol. 71, pp. 102315-102315
Open Access | Times Cited: 29
Self-supervised learning on millions of pre-mRNA sequences improves sequence-based RNA splicing prediction
Ken Chen, Yue Zhou, Maolin Ding, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 19
AdvanceSplice: Integrating N-gram one-hot encoding and ensemble modeling for enhanced accuracy
Mohammad Reza Rezvan, Ali Ghanbari Sorkhi, Jamshid Pirgazi, et al.
Biomedical Signal Processing and Control (2024) Vol. 92, pp. 106017-106017
Closed Access | Times Cited: 7
Genetic compensation between ribosomal protein paralogs mediated by a cognate circular RNA
Amanda Yunn Ee Ng, Seow Neng Chan, Jun Wei Pek
Cell Reports (2024) Vol. 43, Iss. 5, pp. 114228-114228
Open Access | Times Cited: 7
ChatNT: A Multimodal Conversational Agent for DNA, RNA and Protein Tasks
Guillaume Richard, Bernardo P. de Almeida, Hugo Dalla-Torre, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 6
Deciphering RNA splicing logic with interpretable machine learning
Susan E. Liao, Mukund Sudarshan, Oded Regev
Proceedings of the National Academy of Sciences (2023) Vol. 120, Iss. 41
Open Access | Times Cited: 13
Unraveling the chicken T cell repertoire with enhanced genome annotation
Simon Früh, Martin Früh, Benedikt B. Kaufer, et al.
Frontiers in Immunology (2024) Vol. 15
Open Access | Times Cited: 4
Splam: a deep-learning-based splice site predictor that improves spliced alignments
Kuan-Hao Chao, Alan Mao, Steven L. Salzberg, et al.
Genome biology (2024) Vol. 25, Iss. 1
Open Access | Times Cited: 4
Development and validation of animal variant classification guidelines to objectively evaluate genetic variant pathogenicity in domestic animals
Fréderique Boeykens, Marie Abitbol, Heidi Anderson, et al.
Frontiers in Veterinary Science (2024) Vol. 11
Open Access | Times Cited: 4
SProtFP: a machine learning-based method for functional classification of small ORFs in prokaryotes
Akshay Khanduja, Debasisa Mohanty
NAR Genomics and Bioinformatics (2025) Vol. 7, Iss. 1
Open Access
Exon-Intron Boundary Detection Made Easy by Physicochemical Properties of DNA
Dinesh C Sharma, Danish Aslam, Kopal Sharma, et al.
Molecular Omics (2025)
Closed Access
Genomic and Epidemiological Investigations Reveal Chromosomal Integration of the Acipenserid Herpesvirus 3 Genome in Lake Sturgeon Acipenser fulvescens
Sharon C. Clouthier, Umberto Rosani, Arfa Khan, et al.
Viruses (2025) Vol. 17, Iss. 4, pp. 534-534
Open Access
Base editing rescues acid α-glucosidase function in infantile-onset Pompe disease patient-derived cells
Chloe Christensen, Shih‐hsin Kan, Perla Andrade-Heckman, et al.
Molecular Therapy — Nucleic Acids (2024) Vol. 35, Iss. 2, pp. 102220-102220
Open Access | Times Cited: 3
EnsembleSplice: ensemble deep learning model for splice site prediction
Victor Akpokiro, Trevor Martin, Oluwatosin Oluwadare
BMC Bioinformatics (2022) Vol. 23, Iss. 1
Open Access | Times Cited: 13
DRANetSplicer: A Splice Site Prediction Model Based on Deep Residual Attention Networks
Xueyan Liu, Hongyan Zhang, Ying Zeng, et al.
Genes (2024) Vol. 15, Iss. 4, pp. 404-404
Open Access | Times Cited: 2
Assessing the reliability of point mutation as data augmentation for deep learning with genomic data
Hyun‐Jung Lee, Utku Özbulak, Ho-min Park, et al.
BMC Bioinformatics (2024) Vol. 25, Iss. 1
Open Access | Times Cited: 2
SimSpliceEvol2: alternative splicing-aware simulation of biological sequence evolution and transcript phylogenies
Wend Yam Donald Davy Ouedraogo, Aïda Ouangraoua
BMC Bioinformatics (2024) Vol. 25, Iss. 1
Open Access | Times Cited: 2
Computational prediction of human deep intronic variation
Pedro Barbosa, Rosina Savisaar, Maria Carmo‐Fonseca, et al.
GigaScience (2022) Vol. 12
Open Access | Times Cited: 10
Deep Splicer: A CNN Model for Splice Site Prediction in Genetic Sequences
Elisa Fernández-Castillo, Liliana Ibeth Barbosa-Santillán, Luis Eduardo Falcón-Morales, et al.
Genes (2022) Vol. 13, Iss. 5, pp. 907-907
Open Access | Times Cited: 9
Canine models of Charcot-Marie-Tooth: MTMR2, MPZ, and SH3TC2 variants in golden retrievers with congenital hypomyelinating polyneuropathy
Shawna R. Cook, Blair Hooser, D. Colette Williams, et al.
Neuromuscular Disorders (2023) Vol. 33, Iss. 8, pp. 677-691
Open Access | Times Cited: 5
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