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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Normalization and variance stabilization of single-cell RNA-seq data using regularized negative binomial regression
Christoph Hafemeister, Rahul Satija
Genome biology (2019) Vol. 20, Iss. 1
Open Access | Times Cited: 3512

Showing 1-25 of 3512 citing articles:

Comprehensive Integration of Single-Cell Data
Tim Stuart, Andrew Butler, Paul Hoffman, et al.
Cell (2019) Vol. 177, Iss. 7, pp. 1888-1902.e21
Open Access | Times Cited: 12962
Integrated analysis of multimodal single-cell data
Yuhan Hao, Stephanie Hao, Erica Andersen‐Nissen, et al.
Cell (2021) Vol. 184, Iss. 13, pp. 3573-3587.e29
Open Access | Times Cited: 10491
Dictionary learning for integrative, multimodal and scalable single-cell analysis
Yuhan Hao, Tim Stuart, Madeline H. Kowalski, et al.
Nature Biotechnology (2023) Vol. 42, Iss. 2, pp. 293-304
Open Access | Times Cited: 1410
Severe COVID-19 Is Marked by a Dysregulated Myeloid Cell Compartment
Jonas Schulte-Schrepping, Nico Reusch, Daniela Paclik, et al.
Cell (2020) Vol. 182, Iss. 6, pp. 1419-1440.e23
Open Access | Times Cited: 1398
Single-cell chromatin state analysis with Signac
Tim Stuart, Avi Srivastava, Shaista Madad, et al.
Nature Methods (2021) Vol. 18, Iss. 11, pp. 1333-1341
Open Access | Times Cited: 1113
Exploring tissue architecture using spatial transcriptomics
Anjali Rao, Dalia Barkley, Gustavo S. França, et al.
Nature (2021) Vol. 596, Iss. 7871, pp. 211-220
Open Access | Times Cited: 1086
Eleven grand challenges in single-cell data science
David Lähnemann, Johannes Köster, Ewa Szczurek, et al.
Genome biology (2020) Vol. 21, Iss. 1
Open Access | Times Cited: 1045
Single-cell RNA sequencing reveals profibrotic roles of distinct epithelial and mesenchymal lineages in pulmonary fibrosis
Arun C. Habermann, Austin J. Gutierrez, Linh T. Bui, et al.
Science Advances (2020) Vol. 6, Iss. 28
Open Access | Times Cited: 789
Robust decomposition of cell type mixtures in spatial transcriptomics
Dylan Cable, Evan Murray, Luli S. Zou, et al.
Nature Biotechnology (2021) Vol. 40, Iss. 4, pp. 517-526
Open Access | Times Cited: 740
Cell2location maps fine-grained cell types in spatial transcriptomics
Vitalii Kleshchevnikov, Artem Shmatko, Emma Dann, et al.
Nature Biotechnology (2022) Vol. 40, Iss. 5, pp. 661-671
Closed Access | Times Cited: 713
Confronting false discoveries in single-cell differential expression
Jordan W. Squair, Matthieu Gautier, Claudia Kathe, et al.
Nature Communications (2021) Vol. 12, Iss. 1
Open Access | Times Cited: 623
GD2-CAR T cell therapy for H3K27M-mutated diffuse midline gliomas
Robbie G. Majzner, Sneha Ramakrishna, Kristen W. Yeom, et al.
Nature (2022) Vol. 603, Iss. 7903, pp. 934-941
Open Access | Times Cited: 579
Fly Cell Atlas: A single-nucleus transcriptomic atlas of the adult fruit fly
Hongjie Li, Jasper Janssens, Maxime De Waegeneer, et al.
Science (2022) Vol. 375, Iss. 6584
Open Access | Times Cited: 569
Molecular topography of an entire nervous system
Seth R. Taylor, Gabriel Santpere, Alexis Weinreb, et al.
Cell (2021) Vol. 184, Iss. 16, pp. 4329-4347.e23
Open Access | Times Cited: 559
Best practices for single-cell analysis across modalities
Lukas Heumos, Anna C. Schaar, Christopher Lance, et al.
Nature Reviews Genetics (2023) Vol. 24, Iss. 8, pp. 550-572
Open Access | Times Cited: 535
Dysregulation of brain and choroid plexus cell types in severe COVID-19
Andrew C. Yang, Fabian Kern, Patricia Morán Losada, et al.
Nature (2021) Vol. 595, Iss. 7868, pp. 565-571
Open Access | Times Cited: 529
Obesity Shapes Metabolism in the Tumor Microenvironment to Suppress Anti-Tumor Immunity
Alison E. Ringel, Jefte M. Drijvers, Gregory J. Baker, et al.
Cell (2020) Vol. 183, Iss. 7, pp. 1848-1866.e26
Open Access | Times Cited: 520
A single-cell atlas of human and mouse white adipose tissue
Margo P. Emont, Christopher Jacobs, Adam L. Essene, et al.
Nature (2022) Vol. 603, Iss. 7903, pp. 926-933
Open Access | Times Cited: 513
Single-cell analyses reveal key immune cell subsets associated with response to PD-L1 blockade in triple-negative breast cancer
Yuanyuan Zhang, Hongyan Chen, Hongnan Mo, et al.
Cancer Cell (2021) Vol. 39, Iss. 12, pp. 1578-1593.e8
Open Access | Times Cited: 504
Proteogenomic and metabolomic characterization of human glioblastoma
Liang-Bo Wang, Alla Karpova, Marina Gritsenko, et al.
Cancer Cell (2021) Vol. 39, Iss. 4, pp. 509-528.e20
Open Access | Times Cited: 486
Host-Viral Infection Maps Reveal Signatures of Severe COVID-19 Patients
Pierre Bost, Amir Giladi, Yang Liu, et al.
Cell (2020) Vol. 181, Iss. 7, pp. 1475-1488.e12
Open Access | Times Cited: 483
An introduction to spatial transcriptomics for biomedical research
Cameron G. Williams, Hyun Jae Lee, Takahiro Asatsuma, et al.
Genome Medicine (2022) Vol. 14, Iss. 1
Open Access | Times Cited: 479
Ageing hallmarks exhibit organ-specific temporal signatures
Nicholas Schaum, Benoit Lehallier, Oliver Hãhn, et al.
Nature (2020) Vol. 583, Iss. 7817, pp. 596-602
Open Access | Times Cited: 476
Feature selection and dimension reduction for single-cell RNA-Seq based on a multinomial model
F. William Townes, Stephanie C. Hicks, Martin J. Aryee, et al.
Genome biology (2019) Vol. 20, Iss. 1
Open Access | Times Cited: 425
Spatiotemporal Immune Landscape of Colorectal Cancer Liver Metastasis at Single-Cell Level
Yingcheng Wu, Shuaixi Yang, Jiaqiang Ma, et al.
Cancer Discovery (2021) Vol. 12, Iss. 1, pp. 134-153
Open Access | Times Cited: 409
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