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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

A curated benchmark of enhancer-gene interactions for evaluating enhancer-target gene prediction methods
Jill E. Moore, Henry Pratt, Michael Purcaro, et al.
Genome biology (2020) Vol. 21, Iss. 1
Open Access | Times Cited: 99

Showing 1-25 of 99 citing articles:

Regulatory genomic circuitry of human disease loci by integrative epigenomics
Carles A. Boix, Benjamin T. James, Yongjin Park, et al.
Nature (2021) Vol. 590, Iss. 7845, pp. 300-307
Open Access | Times Cited: 345
Methods for ChIP-seq analysis: A practical workflow and advanced applications
Ryuichiro Nakato, Toyonori Sakata
Methods (2020) Vol. 187, pp. 44-53
Open Access | Times Cited: 180
Chromatin accessibility profiling methods
Liesbeth Minnoye, Georgi K. Marinov, Thomas Krausgruber, et al.
Nature Reviews Methods Primers (2021) Vol. 1, Iss. 1
Open Access | Times Cited: 135
Single-molecule footprinting identifies context-dependent regulation of enhancers by DNA methylation
Elisa Kreibich, Rozemarijn Kleinendorst, Guido Barzaghi, et al.
Molecular Cell (2023) Vol. 83, Iss. 5, pp. 787-802.e9
Open Access | Times Cited: 70
A multi-omic single-cell landscape of human gynecologic malignancies
Matthew J. Regner, Kamila Wiśniewska, Susana García‐Recio, et al.
Molecular Cell (2021) Vol. 81, Iss. 23, pp. 4924-4941.e10
Open Access | Times Cited: 80
Human microglia maturation is underpinned by specific gene regulatory networks
Claudia Z. Han, Rick Z. Li, Emily A. Hansen, et al.
Immunity (2023) Vol. 56, Iss. 9, pp. 2152-2171.e13
Open Access | Times Cited: 27
Chromatin remodeling due to degradation of citrate carrier impairs osteogenesis of aged mesenchymal stem cells
Andromachi Pouikli, Swati Parekh, Monika Maleszewska, et al.
Nature Aging (2021) Vol. 1, Iss. 9, pp. 810-825
Open Access | Times Cited: 56
Enhancer retargeting of CDX2 and UBTF::ATXN7L3 define a subtype of high-risk B-progenitor acute lymphoblastic leukemia
Shunsuke Kimura, Lindsey E. Montefiori, Ilaria Iacobucci, et al.
Blood (2022) Vol. 139, Iss. 24, pp. 3519-3531
Open Access | Times Cited: 36
Identification and functional validation of super-enhancers in Arabidopsis thaliana
Hainan Zhao, Mingyu Yang, Jade Bishop, et al.
Proceedings of the National Academy of Sciences (2022) Vol. 119, Iss. 48
Open Access | Times Cited: 30
Integrative analysis of transcriptome dynamics during human craniofacial development identifies candidate disease genes
Tara N. Yankee, Sungryong Oh, Emma Wentworth Winchester, et al.
Nature Communications (2023) Vol. 14, Iss. 1
Open Access | Times Cited: 23
Loss of MLL3/4 decouples enhancer H3K4 monomethylation, H3K27 acetylation, and gene activation during embryonic stem cell differentiation
Ryan M. Boileau, Kevin X. Chen, Robert Blelloch
Genome biology (2023) Vol. 24, Iss. 1
Open Access | Times Cited: 18
Exploring 3D chromatin contacts in gene regulation: The evolution of approaches for the identification of functional enhancer-promoter interaction
Hang Xu, Shijie Zhang, Xianfu Yi, et al.
Computational and Structural Biotechnology Journal (2020) Vol. 18, pp. 558-570
Open Access | Times Cited: 49
Massively Parallel Reporter Assays: Defining Functional Psychiatric Genetic Variants Across Biological Contexts
Bernard Mulvey, Tomás Lagunas, Joseph D. Dougherty
Biological Psychiatry (2020) Vol. 89, Iss. 1, pp. 76-89
Open Access | Times Cited: 44
A hierarchical regulatory network analysis of the vitamin D induced transcriptome reveals novel regulators and complete VDR dependency in monocytes
Timothy Warwick, Marcel H. Schulz, Stefan Günther, et al.
Scientific Reports (2021) Vol. 11, Iss. 1
Open Access | Times Cited: 40
GREEN-DB: a framework for the annotation and prioritization of non-coding regulatory variants from whole-genome sequencing data
Edoardo Giacopuzzi, Niko Popitsch, Jenny C. Taylor
Nucleic Acids Research (2022) Vol. 50, Iss. 5, pp. 2522-2535
Open Access | Times Cited: 25
Multitissue H3K27ac profiling of GTEx samples links epigenomic variation to disease
Lei Hou, Xushen Xiong, Yongjin Park, et al.
Nature Genetics (2023) Vol. 55, Iss. 10, pp. 1665-1676
Open Access | Times Cited: 15
iEnhancer-GAN: A Deep Learning Framework in Combination with Word Embedding and Sequence Generative Adversarial Net to Identify Enhancers and Their Strength
Runtao Yang, Feng Wu, Chengjin Zhang, et al.
International Journal of Molecular Sciences (2021) Vol. 22, Iss. 7, pp. 3589-3589
Open Access | Times Cited: 30
Constructing gene regulatory networks using epigenetic data
Abhijeet R. Sonawane, Dawn L. DeMeo, John Quackenbush, et al.
npj Systems Biology and Applications (2021) Vol. 7, Iss. 1
Open Access | Times Cited: 30
DnaJC7 in Amyotrophic Lateral Sclerosis
Allison A. Dilliott, Catherine M. Andary, Meaghan Stoltz, et al.
International Journal of Molecular Sciences (2022) Vol. 23, Iss. 8, pp. 4076-4076
Open Access | Times Cited: 22
Hypoxia promotes osteogenesis by facilitating acetyl‐CoA ‐mediated mitochondrial–nuclear communication
Andromachi Pouikli, Monika Maleszewska, Swati Parekh, et al.
The EMBO Journal (2022) Vol. 41, Iss. 23
Open Access | Times Cited: 20
High-Resolution Mapping of Multiway Enhancer-Promoter Interactions Regulating Pathogen Detection
Pranitha Vangala, Rachel Murphy, Sofia A. Quinodoz, et al.
Molecular Cell (2020) Vol. 80, Iss. 2, pp. 359-373.e8
Open Access | Times Cited: 28
Computational methods for the prediction of chromatin interaction and organization using sequence and epigenomic profiles
Huan Tao, Hao Li, Kang Xu, et al.
Briefings in Bioinformatics (2020)
Open Access | Times Cited: 28
Genomic enhancers in cardiac development and disease
Chukwuemeka George Anene-Nzelu, Chang Jie Mick Lee, Wilson Lek Wen Tan, et al.
Nature Reviews Cardiology (2021) Vol. 19, Iss. 1, pp. 7-25
Closed Access | Times Cited: 26
Functional Characterization of Genetic Variant Effects on Expression
Elise D. Flynn, Tuuli Lappalainen
Annual Review of Biomedical Data Science (2022) Vol. 5, Iss. 1, pp. 119-139
Open Access | Times Cited: 17
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