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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Megabase-scale methylation phasing using nanopore long reads and NanoMethPhase
Vahid Akbari, Jean‐Michel Garant, Kieran O’Neill, et al.
Genome biology (2021) Vol. 22, Iss. 1
Open Access | Times Cited: 57

Showing 1-25 of 57 citing articles:

DNA methylation-calling tools for Oxford Nanopore sequencing: a survey and human epigenome-wide evaluation
Yang Liu, Wojciech Rosikiewicz, Ziwei Pan, et al.
Genome biology (2021) Vol. 22, Iss. 1
Open Access | Times Cited: 163
eXclusionarY: 10 years later, where are the sex chromosomes in GWASs?
Lei Sun, Zhong Wang, Tianyuan Lu, et al.
The American Journal of Human Genetics (2023) Vol. 110, Iss. 6, pp. 903-912
Open Access | Times Cited: 47
DNA 5-methylcytosine detection and methylation phasing using PacBio circular consensus sequencing
Peng Ni, Fan Nie, Zeyu Zhong, et al.
Nature Communications (2023) Vol. 14, Iss. 1
Open Access | Times Cited: 47
A signal processing and deep learning framework for methylation detection using Oxford Nanopore sequencing
Mian Umair Ahsan, Anagha Gouru, Joe Chan, et al.
Nature Communications (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 47
Genome-wide detection of imprinted differentially methylated regions using nanopore sequencing
Vahid Akbari, Jean‐Michel Garant, Kieran O’Neill, et al.
eLife (2022) Vol. 11
Open Access | Times Cited: 42
BISCUIT: an efficient, standards-compliant tool suite for simultaneous genetic and epigenetic inference in bulk and single-cell studies
Wanding Zhou, Benjamin K. Johnson, Jacob Morrison, et al.
Nucleic Acids Research (2024) Vol. 52, Iss. 6, pp. e32-e32
Open Access | Times Cited: 13
Rockfish: A transformer-based model for accurate 5-methylcytosine prediction from nanopore sequencing
Dominik Stanojević, Zhe Li, Sara Bakić, et al.
Nature Communications (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 11
MethPhaser: methylation-based long-read haplotype phasing of human genomes
Yilei Fu, Sergey Aganezov, Medhat Mahmoud, et al.
Nature Communications (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 9
Evolution of genome-wide methylation profiling technologies
Carolina Montaño, Winston Timp
Genome Research (2025) Vol. 35, Iss. 4, pp. 572-582
Closed Access | Times Cited: 1
Assessing methylation detection for primary human tissue using Nanopore sequencing
Rylee Genner, Stuart Akeson, Melissa Meredith, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 7
Application of long-read sequencing to the detection of structural variants in human cancer genomes
Yoshitaka Sakamoto, Suzuko Zaha, Yutaka Suzuki, et al.
Computational and Structural Biotechnology Journal (2021) Vol. 19, pp. 4207-4216
Open Access | Times Cited: 36
Parent-of-origin detection and chromosome-scale haplotyping using long-read DNA methylation sequencing and Strand-seq
Vahid Akbari, Vincent C. T. Hanlon, Kieran O’Neill, et al.
Cell Genomics (2022) Vol. 3, Iss. 1, pp. 100233-100233
Open Access | Times Cited: 27
Long-read sequencing of an advanced cancer cohort resolves rearrangements, unravels haplotypes, and reveals methylation landscapes
Kieran O’Neill, Erin Pleasance, Jeremy Fan, et al.
Cell Genomics (2024) Vol. 4, Iss. 11, pp. 100674-100674
Open Access | Times Cited: 6
Diagnosis of Prader-Willi syndrome and Angelman syndrome by targeted nanopore long-read sequencing
Mamiko Yamada, Hironobu Okuno, Nobuhiko Okamoto, et al.
European Journal of Medical Genetics (2022) Vol. 66, Iss. 2, pp. 104690-104690
Open Access | Times Cited: 21
The Promising Role of Nanopore Sequencing in Cancer Diagnostics and Treatment
Xinming Su, Qingyuan Lin, Bin Liu, et al.
Cell Insight (2025) Vol. 4, Iss. 2, pp. 100229-100229
Open Access
The technology landscape for detection of DNA methylation in cancer liquid biopsies
Isabelle Neefs, Joe Ibrahim, Marc Peeters, et al.
Epigenetics (2025) Vol. 20, Iss. 1
Open Access
Double and single stranded detection of 5-methylcytosine and 5-hydroxymethylcytosine with nanopore sequencing
Dominic Oliver Halliwell, Floris Honig, Stefan Bagby, et al.
Communications Biology (2025) Vol. 8, Iss. 1
Open Access
Diagnostic utility of single-locus DNA methylation mark in Sotos syndrome developed by nanopore sequencing-based episignature
Takeshi Mizuguchi, Nobuhiko Okamoto, Taiki Hara, et al.
Clinical Epigenetics (2025) Vol. 17, Iss. 1
Open Access
Computational analysis of DNA methylation from long-read sequencing
Yilei Fu, Winston Timp, Fritz J. Sedlazeck
Nature Reviews Genetics (2025)
Closed Access
Clinical genome sequencing in patients with hereditary breast and ovarian cancer: Concept, implementation and benefits
Dennis Witt, Marc Sturm, Antje Stäbler, et al.
The Breast (2025) Vol. 82, pp. 104505-104505
Open Access
Enhanced Detection of Mitochondrial Heteroplasmy and DNA Hypomethylation in Adipose-Derived Mesenchymal Stem Cells Using a Novel Adaptive Sampling Protocol
Antonina Gospodinova, Yuliia Mariienko, Diana Pendicheva-Duhlenska, et al.
Applied Sciences (2025) Vol. 15, Iss. 11, pp. 5822-5822
Open Access
The admixed brushtail possum genome reveals invasion history in New Zealand and novel imprinted genes
Donna M. Bond, Oscar Ortega‐Recalde, Melanie K. Laird, et al.
Nature Communications (2023) Vol. 14, Iss. 1
Open Access | Times Cited: 9
Kagami Ogata syndrome: a small deletion refines critical region for imprinting
Gonench Kilich, Kelly Hassey, Edward M. Behrens, et al.
npj Genomic Medicine (2024) Vol. 9, Iss. 1
Open Access | Times Cited: 3
DeepBAM: a high-accuracy single-molecule CpG methylation detection tool for Oxford nanopore sequencing.
Xin Bai, Hui-Cong Yao, Bo Wu, et al.
Briefings in Bioinformatics (2024) Vol. 25, Iss. 5
Open Access | Times Cited: 3
An Epigenetic Aging Clock for Cattle Using Portable Sequencing Technology
Ben J. Hayes, Loan Nguyen, Mehrnush Forutan, et al.
Frontiers in Genetics (2021) Vol. 12
Open Access | Times Cited: 20
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