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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Comparison and evaluation of statistical error models for scRNA-seq
Saket Choudhary, Rahul Satija
Genome biology (2022) Vol. 23, Iss. 1
Open Access | Times Cited: 364

Showing 1-25 of 364 citing articles:

cGAS–STING drives ageing-related inflammation and neurodegeneration
Muhammet F. Gülen, Natasha Samson, Alexander Keller, et al.
Nature (2023) Vol. 620, Iss. 7973, pp. 374-380
Open Access | Times Cited: 425
DestVI identifies continuums of cell types in spatial transcriptomics data
Romain Lopez, Baoguo Li, Hadas Keren‐Shaul, et al.
Nature Biotechnology (2022) Vol. 40, Iss. 9, pp. 1360-1369
Open Access | Times Cited: 145
Normalizing and denoising protein expression data from droplet-based single cell profiling
Matthew P. Mulè, Andrew J. Martins, John S. Tsang
Nature Communications (2022) Vol. 13, Iss. 1
Open Access | Times Cited: 129
Analytic Pearson residuals for normalization of single-cell RNA-seq UMI data
Jan Lause, Philipp Berens, Dmitry Kobak
Genome biology (2021) Vol. 22, Iss. 1
Open Access | Times Cited: 114
Slide-tags enables single-nucleus barcoding for multimodal spatial genomics
Andrew J. C. Russell, Jackson A. Weir, Naeem Nadaf, et al.
Nature (2023) Vol. 625, Iss. 7993, pp. 101-109
Open Access | Times Cited: 91
Unique functional responses differentially map onto genetic subtypes of dopamine neurons
Maite Azcorra, Zachary Gaertner, Connor Davidson, et al.
Nature Neuroscience (2023) Vol. 26, Iss. 10, pp. 1762-1774
Open Access | Times Cited: 86
Comparison of transformations for single-cell RNA-seq data
Constantin Ahlmann-Eltze, Wolfgang Huber
Nature Methods (2023) Vol. 20, Iss. 5, pp. 665-672
Open Access | Times Cited: 84
Integrated single-nucleus and spatial transcriptomics captures transitional states in soybean nodule maturation
Zhijian Liu, Xiangying Kong, Yanping Long, et al.
Nature Plants (2023) Vol. 9, Iss. 4, pp. 515-524
Open Access | Times Cited: 82
Cell-type profiling in salamanders identifies innovations in vertebrate forebrain evolution
Jamie Woych, Alonso Ortega Gurrola, Astrid Deryckere, et al.
Science (2022) Vol. 377, Iss. 6610
Open Access | Times Cited: 76
B cell receptor signaling in germinal centers prolongs survival and primes B cells for selection
Spencer T. Chen, Thiago Y. Oliveira, Anna Gazumyan, et al.
Immunity (2023) Vol. 56, Iss. 3, pp. 547-561.e7
Open Access | Times Cited: 55
The spatial landscape of gene expression isoforms in tissue sections
Kévin Lebrigand, Joseph Bergenstråhle, Kim Thrane, et al.
Nucleic Acids Research (2023) Vol. 51, Iss. 8, pp. e47-e47
Open Access | Times Cited: 45
Modeling embryo-endometrial interface recapitulating human embryo implantation
Shun Shibata, Shun Endo, Luís Augusto Eijy Nagai, et al.
Science Advances (2024) Vol. 10, Iss. 8
Open Access | Times Cited: 32
Long somatic DNA-repeat expansion drives neurodegeneration in Huntington disease
Robert E. Handsaker, Seva Kashin, Nora Reed, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 26
The choroid plexus synergizes with immune cells during neuroinflammation
Huixin Xu, Peter Lotfy, Sivan Gelb, et al.
Cell (2024) Vol. 187, Iss. 18, pp. 4946-4963.e17
Open Access | Times Cited: 25
Prevotella copri and microbiota members mediate the beneficial effects of a therapeutic food for malnutrition
Hao-Wei Chang, Evan M. Lee, William Yi Wang, et al.
Nature Microbiology (2024) Vol. 9, Iss. 4, pp. 922-937
Open Access | Times Cited: 23
A data-driven single-cell and spatial transcriptomic map of the human prefrontal cortex
Louise A. Huuki-Myers, Abby Spangler, Nicholas J. Eagles, et al.
Science (2024) Vol. 384, Iss. 6698
Closed Access | Times Cited: 23
CD200+ fibroblasts form a pro-resolving mesenchymal network in arthritis
Simon Rauber, Hashem Mohammadian, Christian Schmidkonz, et al.
Nature Immunology (2024) Vol. 25, Iss. 4, pp. 682-692
Open Access | Times Cited: 21
Challenges and best practices in omics benchmarking
Thomas G. Brooks, Nicholas F. Lahens, Antonijo Mrčela, et al.
Nature Reviews Genetics (2024) Vol. 25, Iss. 5, pp. 326-339
Closed Access | Times Cited: 17
Long somatic DNA-repeat expansion drives neurodegeneration in Huntington’s disease
Robert E. Handsaker, Seva Kashin, Nora Reed, et al.
Cell (2025)
Open Access | Times Cited: 15
Molecular and cellular dynamics of the developing human neocortex
Li Wang, Cheng Wang, Juan Moriano, et al.
Nature (2025)
Open Access | Times Cited: 7
A comprehensive spatio-cellular map of the human hypothalamus
John A. Tadross, Lukas Steuernagel, Georgina K.C. Dowsett, et al.
Nature (2025) Vol. 639, Iss. 8055, pp. 708-716
Open Access | Times Cited: 7
Advancements in single-cell RNA sequencing and spatial transcriptomics: transforming biomedical research
Getnet Molla Desta, Alemayehu Godana Birhanu
Acta Biochimica Polonica (2025) Vol. 72
Open Access | Times Cited: 6
Single cell approaches define neural stem cell niches and identify microglial ligands that can enhance precursor-mediated oligodendrogenesis
Ashleigh Willis, Danielle Jeong, Yunlong Liu, et al.
Cell Reports (2025) Vol. 44, Iss. 1, pp. 115194-115194
Open Access | Times Cited: 2
Human skeletal muscle fiber heterogeneity beyond myosin heavy chains
Roger Moreno‐Justicia, Thibaux Van der Stede, Ben Stocks, et al.
Nature Communications (2025) Vol. 16, Iss. 1
Open Access | Times Cited: 2
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