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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Statistical and machine learning methods for spatially resolved transcriptomics data analysis
Zexian Zeng, Yawei Li, Yiming Li, et al.
Genome biology (2022) Vol. 23, Iss. 1
Open Access | Times Cited: 125

Showing 1-25 of 125 citing articles:

Multimodal machine learning in precision health: A scoping review
Adrienne Kline, Hanyin Wang, Yikuan Li, et al.
npj Digital Medicine (2022) Vol. 5, Iss. 1
Open Access | Times Cited: 220
Applications of single-cell RNA sequencing in drug discovery and development
Bram Van de Sande, Joon Sang Lee, Euphemia Mutasa-Gottgens, et al.
Nature Reviews Drug Discovery (2023) Vol. 22, Iss. 6, pp. 496-520
Open Access | Times Cited: 202
Clinical and translational values of spatial transcriptomics
Linlin Zhang, Dongsheng Chen, Dongli Song, et al.
Signal Transduction and Targeted Therapy (2022) Vol. 7, Iss. 1
Open Access | Times Cited: 120
An Unsupervised Machine Learning Algorithms: Comprehensive Review
Samreen Naeem, Aqib Ali, Sania Anam, et al.
International Journal of Computing and Digital Systems (2023) Vol. 13, Iss. 1, pp. 911-921
Open Access | Times Cited: 92
Computational solutions for spatial transcriptomics
Iivari Kleino, Paulina FrolovaitÄ—, Tomi Suomi, et al.
Computational and Structural Biotechnology Journal (2022) Vol. 20, pp. 4870-4884
Open Access | Times Cited: 86
Spatial omics technologies at multimodal and single cell/subcellular level
Jiwoon Park, Junbum Kim, Tyler Lewy, et al.
Genome biology (2022) Vol. 23, Iss. 1
Open Access | Times Cited: 76
Annotation of spatially resolved single-cell data with STELLAR
Maria Brbić, Kaidi Cao, John W. Hickey, et al.
Nature Methods (2022) Vol. 19, Iss. 11, pp. 1411-1418
Open Access | Times Cited: 72
SODB facilitates comprehensive exploration of spatial omics data
Zhiyuan Yuan, Wentao Pan, Xuan Zhao, et al.
Nature Methods (2023) Vol. 20, Iss. 3, pp. 387-399
Closed Access | Times Cited: 70
Informing immunotherapy with multi-omics driven machine learning
Yawei Li, Wu Xin, Deyu Fang, et al.
npj Digital Medicine (2024) Vol. 7, Iss. 1
Open Access | Times Cited: 24
MENDER: fast and scalable tissue structure identification in spatial omics data
Zhiyuan Yuan
Nature Communications (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 21
Spatial transcriptomics in health and disease
Sanjay Jain, Michael T. Eadon
Nature Reviews Nephrology (2024) Vol. 20, Iss. 10, pp. 659-671
Closed Access | Times Cited: 20
A review of cancer data fusion methods based on deep learning
Yuxin Zhao, Xiaobo Li, Changjun Zhou, et al.
Information Fusion (2024) Vol. 108, pp. 102361-102361
Closed Access | Times Cited: 17
Identification of immune cell infiltration and diagnostic biomarkers in unstable atherosclerotic plaques by integrated bioinformatics analysis and machine learning
Jing Wang, Zijian Kang, Yandong Liu, et al.
Frontiers in Immunology (2022) Vol. 13
Open Access | Times Cited: 63
A guidebook of spatial transcriptomic technologies, data resources and analysis approaches
Liangchen Yue, Feng Liu, Jiongsong Hu, et al.
Computational and Structural Biotechnology Journal (2023) Vol. 21, pp. 940-955
Open Access | Times Cited: 37
STGNNks: Identifying cell types in spatial transcriptomics data based on graph neural network, denoising auto-encoder, and k-sums clustering
Lihong Peng, Xianzhi He, Xinhuai Peng, et al.
Computers in Biology and Medicine (2023) Vol. 166, pp. 107440-107440
Closed Access | Times Cited: 27
SPIRAL: integrating and aligning spatially resolved transcriptomics data across different experiments, conditions, and technologies
Tiantian Guo, Zhiyuan Yuan, Yan Pan, et al.
Genome biology (2023) Vol. 24, Iss. 1
Open Access | Times Cited: 25
Deep learning in spatially resolved transcriptomics: a comprehensive technical view
Roxana Zahedi, Mohammad Reza Eftekhariyan Ghamsari, Ahmadreza Argha, et al.
Briefings in Bioinformatics (2024) Vol. 25, Iss. 2
Open Access | Times Cited: 15
Sopa: a technology-invariant pipeline for analyses of image-based spatial omics
Quentin Blampey, Kevin Mulder, Margaux Gardet, et al.
Nature Communications (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 9
Navigating the landscapes of spatial transcriptomics: How computational methods guide the way
Runze Li, Xu Chen, Xuerui Yang
Wiley Interdisciplinary Reviews - RNA (2024) Vol. 15, Iss. 2
Closed Access | Times Cited: 8
Advancing precision cancer immunotherapy drug development, administration, and response prediction with AI-enabled Raman spectroscopy
Jay Chadokiya, Kai Chang, Saurabh Sharma, et al.
Frontiers in Immunology (2025) Vol. 15
Open Access | Times Cited: 1
Predicting climate-driven shift of the East Mediterranean endemic Cynara cornigera Lindl
Heba Bedair, Yehia Hazzazi, Asmaa Abo Hatab, et al.
Frontiers in Plant Science (2025) Vol. 16
Open Access | Times Cited: 1
Multi-Omics Techniques for Soybean Molecular Breeding
Pan Cao, Ying Zhao, Fengjiao Wu, et al.
International Journal of Molecular Sciences (2022) Vol. 23, Iss. 9, pp. 4994-4994
Open Access | Times Cited: 34
SPASCER: spatial transcriptomics annotation at single-cell resolution
Zhiwei Fan, Yangyang Luo, Huifen Lu, et al.
Nucleic Acids Research (2022) Vol. 51, Iss. D1, pp. D1138-D1149
Open Access | Times Cited: 33
Latent feature extraction with a prior-based self-attention framework for spatial transcriptomics
Zhen Li, Xiaoyang Chen, Xuegong Zhang, et al.
Genome Research (2023) Vol. 33, Iss. 10, pp. 1757-1773
Open Access | Times Cited: 21
SINFONIA: Scalable Identification of Spatially Variable Genes for Deciphering Spatial Domains
Rui Jiang, Zhen Li, Yuhang Jia, et al.
Cells (2023) Vol. 12, Iss. 4, pp. 604-604
Open Access | Times Cited: 19
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