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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

An Integrated Framework Advancing Membrane Protein Modeling and Design
Rebecca F. Alford, Julia Koehler Leman, Brian D. Weitzner, et al.
PLoS Computational Biology (2015) Vol. 11, Iss. 9, pp. e1004398-e1004398
Open Access | Times Cited: 170

Showing 1-25 of 170 citing articles:

The Rosetta All-Atom Energy Function for Macromolecular Modeling and Design
Rebecca F. Alford, Andrew Leaver‐Fay, Jeliazko R. Jeliazkov, et al.
Journal of Chemical Theory and Computation (2017) Vol. 13, Iss. 6, pp. 3031-3048
Open Access | Times Cited: 1256
Coarse-Grained Protein Models and Their Applications
Sebastian Kmiecik, Dominik Gront, Michał Koliński, et al.
Chemical Reviews (2016) Vol. 116, Iss. 14, pp. 7898-7936
Open Access | Times Cited: 947
Macromolecular modeling and design in Rosetta: recent methods and frameworks
Julia Koehler Leman, Brian D. Weitzner, Steven M. Lewis, et al.
Nature Methods (2020) Vol. 17, Iss. 7, pp. 665-680
Open Access | Times Cited: 710
Antidepressant drugs act by directly binding to TRKB neurotrophin receptors
Plínio Casarotto, Mykhailo Girych, Senem Merve Fred, et al.
Cell (2021) Vol. 184, Iss. 5, pp. 1299-1313.e19
Open Access | Times Cited: 514
Protocols for Molecular Modeling with Rosetta3 and RosettaScripts
Brian J. Bender, Alberto Cisneros, Amanda M. Duran, et al.
Biochemistry (2016) Vol. 55, Iss. 34, pp. 4748-4763
Open Access | Times Cited: 204
Accurate computational design of multipass transmembrane proteins
Peilong Lu, Duyoung Min, Frank DiMaio, et al.
Science (2018) Vol. 359, Iss. 6379, pp. 1042-1046
Open Access | Times Cited: 186
Recent advances in de novo protein design: Principles, methods, and applications
Xingjie Pan, Tanja Kortemme
Journal of Biological Chemistry (2021) Vol. 296, pp. 100558-100558
Open Access | Times Cited: 181
Structures of the σ2 receptor enable docking for bioactive ligand discovery
Assaf Alon, Jiankun Lyu, João M. Bráz, et al.
Nature (2021) Vol. 600, Iss. 7890, pp. 759-764
Open Access | Times Cited: 151
Protein Design: From the Aspect of Water Solubility and Stability
Rui Qing, Shilei Hao, Eva Smorodina, et al.
Chemical Reviews (2022) Vol. 122, Iss. 18, pp. 14085-14179
Open Access | Times Cited: 148
Membrane proteins structures: A review on computational modeling tools
José Guilherme de Almeida, António J. Preto, Panagiotis I. Koukos, et al.
Biochimica et Biophysica Acta (BBA) - Biomembranes (2017) Vol. 1859, Iss. 10, pp. 2021-2039
Open Access | Times Cited: 95
Integrative Modelling of Biomolecular Complexes
Panagiotis I. Koukos, Alexandre M. J. J. Bonvin
Journal of Molecular Biology (2019) Vol. 432, Iss. 9, pp. 2861-2881
Open Access | Times Cited: 89
Protein Structure Prediction and Design in a Biologically Realistic Implicit Membrane
Rebecca F. Alford, Patrick J. Fleming, Karen G. Fleming, et al.
Biophysical Journal (2020) Vol. 118, Iss. 8, pp. 2042-2055
Open Access | Times Cited: 77
Interdependence of a mechanosensitive anion channel and glutamate receptors in distal wound signaling
Jacob Moe‐Lange, Nicoline M. Gappel, Mackenzie Machado, et al.
Science Advances (2021) Vol. 7, Iss. 37
Open Access | Times Cited: 63
Caveolin-1 dolines form a distinct and rapid caveolae-independent mechanoadaptation system
Fidel‐Nicolás Lolo, Nikhil Walani, Eric Seemann, et al.
Nature Cell Biology (2022) Vol. 25, Iss. 1, pp. 120-133
Open Access | Times Cited: 45
Recent Advances in NMR Protein Structure Prediction with ROSETTA
Julia Koehler Leman, Georg Künze
International Journal of Molecular Sciences (2023) Vol. 24, Iss. 9, pp. 7835-7835
Open Access | Times Cited: 23
The Rosetta all-atom energy function for macromolecular modeling and design
Rebecca F. Alford, Andrew Leaver‐Fay, Jeliazko R. Jeliazkov, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2017)
Open Access | Times Cited: 71
Determinants of Endoplasmic Reticulum-to-Lipid Droplet Protein Targeting
Maria-Jesus Olarte, Siyoung Kim, Morris E. Sharp, et al.
Developmental Cell (2020) Vol. 54, Iss. 4, pp. 471-487.e7
Open Access | Times Cited: 61
Membrane receptor activation mechanisms and transmembrane peptide tools to elucidate them
Justin M. Westerfield, Francisco N. Barrera
Journal of Biological Chemistry (2019) Vol. 295, Iss. 7, pp. 1792-1814
Open Access | Times Cited: 58
Evolution of the SARS‐CoV‐2 proteome in three dimensions (3D) during the first 6 months of the COVID‐19 pandemic
Joseph H. Lubin, Christine Zardecki, Elliott M. Dolan, et al.
Proteins Structure Function and Bioinformatics (2021) Vol. 90, Iss. 5, pp. 1054-1080
Open Access | Times Cited: 42
SPICA Force Field for Proteins and Peptides
Shuhei Kawamoto, Huihui Liu, Yusuke Miyazaki, et al.
Journal of Chemical Theory and Computation (2022) Vol. 18, Iss. 5, pp. 3204-3217
Closed Access | Times Cited: 33
Reconstructing the transport cycle in the sugar porter superfamily using coevolution-powered machine learning
Darko Mitrovic, Sarah McComas, Claudia Alleva, et al.
eLife (2023) Vol. 12
Open Access | Times Cited: 18
Interpreting the molecular mechanisms of disease variants in human transmembrane proteins
Johanna K. S. Tiemann, Henrike Zschach, Kresten Lindorff‐Larsen, et al.
Biophysical Journal (2023) Vol. 122, Iss. 11, pp. 2176-2191
Open Access | Times Cited: 17
A Cross-linking Mass Spectrometry Approach Defines Protein Interactions in Yeast Mitochondria
A. Linden, Markus Deckers, Iwan Parfentev, et al.
Molecular & Cellular Proteomics (2020) Vol. 19, Iss. 7, pp. 1161-1178
Open Access | Times Cited: 46
The emerging role of computational design in peptide macrocycle drug discovery
Vikram Khipple Mulligan
Expert Opinion on Drug Discovery (2020) Vol. 15, Iss. 7, pp. 833-852
Open Access | Times Cited: 41
Uropathogenic Escherichia coli subverts mitochondrial metabolism to enable intracellular bacterial pathogenesis in urinary tract infection
Connor J. Beebout, Gabriella L. Robertson, Bradley I. Reinfeld, et al.
Nature Microbiology (2022) Vol. 7, Iss. 9, pp. 1348-1360
Open Access | Times Cited: 26
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