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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

VDJtools: Unifying Post-analysis of T Cell Receptor Repertoires
Mikhail Shugay, Dmitriy V. Bagaev, Maria A. Turchaninova, et al.
PLoS Computational Biology (2015) Vol. 11, Iss. 11, pp. e1004503-e1004503
Open Access | Times Cited: 580

Showing 1-25 of 580 citing articles:

An RNA vaccine drives immunity in checkpoint-inhibitor-treated melanoma
Uǧur Şahin, Petra Oehm, Evelyna Derhovanessian, et al.
Nature (2020) Vol. 585, Iss. 7823, pp. 107-112
Closed Access | Times Cited: 757
Regulatory T Cells Exhibit Distinct Features in Human Breast Cancer
George Plitas, Catherine Konopacki, Kenmin Wu, et al.
Immunity (2016) Vol. 45, Iss. 5, pp. 1122-1134
Open Access | Times Cited: 605
VDJdb: a curated database of T-cell receptor sequences with known antigen specificity
Mikhail Shugay, Dmitriy V. Bagaev, Ivan V. Zvyagin, et al.
Nucleic Acids Research (2017) Vol. 46, Iss. D1, pp. D419-D427
Open Access | Times Cited: 491
Antigen receptor repertoire profiling from RNA-seq data
Dmitriy A. Bolotin, S. Poslavskii, Alexey N. Davydov, et al.
Nature Biotechnology (2017) Vol. 35, Iss. 10, pp. 908-911
Open Access | Times Cited: 291
Overview of methodologies for T-cell receptor repertoire analysis
Elisa Rosati, C. Marie Dowds, Evaggelia Liaskou, et al.
BMC Biotechnology (2017) Vol. 17, Iss. 1
Open Access | Times Cited: 280
Precursors of human CD4 + cytotoxic T lymphocytes identified by single-cell transcriptome analysis
Veena S. Patil, Ariel Madrigal, Benjamin Joachim Schmiedel, et al.
Science Immunology (2018) Vol. 3, Iss. 19
Open Access | Times Cited: 232
Gut-educated IgA plasma cells defend the meningeal venous sinuses
Zachary Fitzpatrick, Gordon L. Frazer, Ashley Ferro, et al.
Nature (2020) Vol. 587, Iss. 7834, pp. 472-476
Open Access | Times Cited: 230
Clonal selection in the human Vδ1 T cell repertoire indicates γδ TCR-dependent adaptive immune surveillance
Martin S. Davey, Carrie R. Willcox, Stephen Paul Joyce, et al.
Nature Communications (2017) Vol. 8, Iss. 1
Open Access | Times Cited: 226
Two subsets of stem-like CD8+ memory T cell progenitors with distinct fate commitments in humans
Giovanni Galletti, Gabriele De Simone, Emilia Maria Cristina Mazza, et al.
Nature Immunology (2020) Vol. 21, Iss. 12, pp. 1552-1562
Open Access | Times Cited: 225
Production of individualized V gene databases reveals high levels of immunoglobulin genetic diversity
Martin Corcoran, Ganesh E. Phad, Néstor Vázquez Bernat, et al.
Nature Communications (2016) Vol. 7, Iss. 1
Open Access | Times Cited: 210
Applications of Immunogenomics to Cancer
X. Shirley Liu, Elaine R. Mardis
Cell (2017) Vol. 168, Iss. 4, pp. 600-612
Open Access | Times Cited: 198
Vedolizumab is associated with changes in innate rather than adaptive immunity in patients with inflammatory bowel disease
Sebastian Zeißig, Elisa Rosati, C. Marie Dowds, et al.
Gut (2018) Vol. 68, Iss. 1, pp. 25-39
Closed Access | Times Cited: 186
The human Vδ2+ T-cell compartment comprises distinct innate-like Vγ9+ and adaptive Vγ9- subsets
Martin S. Davey, Carrie R. Willcox, Stuart Hunter, et al.
Nature Communications (2018) Vol. 9, Iss. 1
Open Access | Times Cited: 186
High-quality full-length immunoglobulin profiling with unique molecular barcoding
Maria A. Turchaninova, Albert V. Davydov, Olga V. Britanova, et al.
Nature Protocols (2016) Vol. 11, Iss. 9, pp. 1599-1616
Closed Access | Times Cited: 185
Computational Strategies for Dissecting the High-Dimensional Complexity of Adaptive Immune Repertoires
Enkelejda Miho, Alexander Yermanos, Cédric R. Weber, et al.
Frontiers in Immunology (2018) Vol. 9
Open Access | Times Cited: 185
Single-cell atlas of colonic CD8+ T cells in ulcerative colitis
Daniele Corridoni, Agne Antanaviciute, Tarun Gupta, et al.
Nature Medicine (2020) Vol. 26, Iss. 9, pp. 1480-1490
Closed Access | Times Cited: 180
Best practices for bioinformatic characterization of neoantigens for clinical utility
Megan M. Richters, Huiming Xia, Katie M. Campbell, et al.
Genome Medicine (2019) Vol. 11, Iss. 1
Open Access | Times Cited: 176
Mucosal or systemic microbiota exposures shape the B cell repertoire
Hai Li, Julien P. Limenitakis, Victor Greiff, et al.
Nature (2020) Vol. 584, Iss. 7820, pp. 274-278
Open Access | Times Cited: 170
Blood molecular markers associated with COVID‐19 immunopathology and multi‐organ damage
Yanmei Chen, Yuanting Zheng, Ying Yu, et al.
The EMBO Journal (2020) Vol. 39, Iss. 24
Open Access | Times Cited: 168
A case report of clonal EBV-like memory CD4+ T cell activation in fatal checkpoint inhibitor-induced encephalitis
Douglas B. Johnson, Wyatt J. McDonnell, Paula I. González-Ericsson, et al.
Nature Medicine (2019) Vol. 25, Iss. 8, pp. 1243-1250
Open Access | Times Cited: 156
Memory CD4+ T cells are generated in the human fetal intestine
Na Li, Vincent van Unen, Tamim Abdelaal, et al.
Nature Immunology (2019) Vol. 20, Iss. 3, pp. 301-312
Open Access | Times Cited: 146
Single-cell sequencing reveals clonal expansions of pro-inflammatory synovial CD8 T cells expressing tissue-homing receptors in psoriatic arthritis
Frank Penkava, Martin Del Castillo Velasco‐Herrera, Matthew D. Young, et al.
Nature Communications (2020) Vol. 11, Iss. 1
Open Access | Times Cited: 142
TCR meta-clonotypes for biomarker discovery with tcrdist3 enabled identification of public, HLA-restricted clusters of SARS-CoV-2 TCRs
Koshlan Mayer-Blackwell, Stefan A. Schattgen, Liel Cohen-Lavi, et al.
eLife (2021) Vol. 10
Open Access | Times Cited: 141
Neoadjuvant therapy with immune checkpoint blockade, antiangiogenesis, and chemotherapy for locally advanced gastric cancer
Song Li, Wenbin Yu, Fei Xie, et al.
Nature Communications (2023) Vol. 14, Iss. 1
Open Access | Times Cited: 135
Notch signaling and efficacy of PD-1/PD-L1 blockade in relapsed small cell lung cancer
Nitin Roper, Moises J. Velez, Alberto Chiappori, et al.
Nature Communications (2021) Vol. 12, Iss. 1
Open Access | Times Cited: 116
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