Open Access Helper

OpenAlex Citation Counts

OpenAlex Citations Logo

OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Phylogenetic background and habitat drive the genetic diversification of Escherichia coli
Marie Touchon, Perrin Amandine, Jorge A. Moura de Sousa, et al.
PLoS Genetics (2020) Vol. 16, Iss. 6, pp. e1008866-e1008866
Open Access | Times Cited: 176

Showing 1-25 of 176 citing articles:

The population genetics of pathogenic Escherichia coli
Érick Denamur, Olivier Clermont, Stéphane Bonacorsi, et al.
Nature Reviews Microbiology (2020) Vol. 19, Iss. 1, pp. 37-54
Closed Access | Times Cited: 475
The impact of genetic diversity on gene essentiality within the Escherichia coli species
François Rousset, Jose Cabezas-Caballero, Florence Piastra-Facon, et al.
Nature Microbiology (2021) Vol. 6, Iss. 3, pp. 301-312
Open Access | Times Cited: 119
Genomics and pathotypes of the many faces ofEscherichia coli
Jeroen Geurtsen, Mark de Been, Eveline Weerdenburg, et al.
FEMS Microbiology Reviews (2022) Vol. 46, Iss. 6
Open Access | Times Cited: 102
Selfish, promiscuous and sometimes useful: how mobile genetic elements drive horizontal gene transfer in microbial populations
Matthieu Haudiquet, Jorge A. Moura de Sousa, Marie Touchon, et al.
Philosophical Transactions of the Royal Society B Biological Sciences (2022) Vol. 377, Iss. 1861
Open Access | Times Cited: 88
Landscape of mobile genetic elements and their antibiotic resistance cargo in prokaryotic genomes
Supriya Khedkar, Georgy Smyshlyaev, Ivica Letunić, et al.
Nucleic Acids Research (2022) Vol. 50, Iss. 6, pp. 3155-3168
Open Access | Times Cited: 80
Horizontal gene transfer among host-associated microbes
Jorge A. Moura de Sousa, Marta Lourenço, Isabel Gordo
Cell Host & Microbe (2023) Vol. 31, Iss. 4, pp. 513-527
Open Access | Times Cited: 54
Fecal indicator bacteria from environmental sources; strategies for identification to improve water quality monitoring
Megan Devane, Elaine Moriarty, Louise Weaver, et al.
Water Research (2020) Vol. 185, pp. 116204-116204
Closed Access | Times Cited: 126
COPLA, a taxonomic classifier of plasmids
Santiago Redondo, Roger Bartomeus-Peñalver, Luis Vielva, et al.
BMC Bioinformatics (2021) Vol. 22, Iss. 1
Open Access | Times Cited: 95
Niche and local geography shape the pangenome of wastewater- and livestock-associated Enterobacteriaceae
Liam P. Shaw, Kevin Chau, James Kavanagh, et al.
Science Advances (2021) Vol. 7, Iss. 15
Open Access | Times Cited: 84
The Origin of Niches and Species in the Bacterial World
Fernando Baquero, Teresa M. Coque, Juan Carlos Galán, et al.
Frontiers in Microbiology (2021) Vol. 12
Open Access | Times Cited: 82
Major role of iron uptake systems in the intrinsic extra-intestinal virulence of the genus Escherichia revealed by a genome-wide association study
Marco Galardini, Olivier Clermont, Alexandra Baron, et al.
PLoS Genetics (2020) Vol. 16, Iss. 10, pp. e1009065-e1009065
Open Access | Times Cited: 75
PanACoTA: A modular tool for massive microbial comparative genomics
Perrin Amandine, Eduardo P. C. Rocha
bioRxiv (Cold Spring Harbor Laboratory) (2020)
Open Access | Times Cited: 75
StrainGE: a toolkit to track and characterize low-abundance strains in complex microbial communities
Lucas R. van Dijk, Bruce J. Walker, Timothy J. Straub, et al.
Genome biology (2022) Vol. 23, Iss. 1
Open Access | Times Cited: 67
A role for ColV plasmids in the evolution of pathogenic Escherichia coli ST58
Cameron J. Reid, Max L. Cummins, Stefan Börjesson, et al.
Nature Communications (2022) Vol. 13, Iss. 1
Open Access | Times Cited: 64
Interplay between the cell envelope and mobile genetic elements shapes gene flow in populations of the nosocomial pathogen Klebsiella pneumoniae
Matthieu Haudiquet, Amandine Nucci, Olaya Rendueles, et al.
PLoS Biology (2021) Vol. 19, Iss. 7, pp. e3001276-e3001276
Open Access | Times Cited: 63
The utility of Escherichia coli as a contamination indicator for rural drinking water: Evidence from whole genome sequencing
Saskia Nowicki, Zaydah R. deLaurent, Etienne P. de Villiers, et al.
PLoS ONE (2021) Vol. 16, Iss. 1, pp. e0245910-e0245910
Open Access | Times Cited: 62
Genomic evolution of antimicrobial resistance in Escherichia coli
Pimlapas Leekitcharoenphon, Markus Hans Kristofer Johansson, Patrick Munk, et al.
Scientific Reports (2021) Vol. 11, Iss. 1
Open Access | Times Cited: 60
Phylogenetic Group Distribution of Uropathogenic Escherichia coli and Related Antimicrobial Resistance Pattern: A Meta-Analysis and Systematic Review
Mehrdad Halaji, Amirhossein Fayyazi, Ramazan Rajabnia, et al.
Frontiers in Cellular and Infection Microbiology (2022) Vol. 12
Open Access | Times Cited: 51
EnteroBase: hierarchical clustering of 100 000s of bacterial genomes into species/subspecies and populations
Mark Achtman, Zhemin Zhou, Jane Charlesworth, et al.
Philosophical Transactions of the Royal Society B Biological Sciences (2022) Vol. 377, Iss. 1861
Open Access | Times Cited: 44
Origins of transfer establish networks of functional dependencies for plasmid transfer by conjugation
Manuel Ares-Arroyo, Charles Coluzzi, Eduardo P. C. Rocha
Nucleic Acids Research (2022) Vol. 51, Iss. 7, pp. 3001-3016
Open Access | Times Cited: 42
Diverse bacteriophages for biocontrol of ESBL- and AmpC-β-lactamase-producing E. coli
Amira R. Vitt, Anders Nørgaard Sørensen, Martin S. Bojer, et al.
iScience (2024) Vol. 27, Iss. 2, pp. 108826-108826
Open Access | Times Cited: 12
Interactions and evolutionary relationships among bacterial mobile genetic elements
Andrew S. Lang, Alison Buchan, Vincent Burrus
Nature Reviews Microbiology (2025)
Closed Access | Times Cited: 1
The Evolutionary Conservation of Escherichia coli Drug Efflux Pumps Supports Physiological Functions
Tanisha Teelucksingh, Laura K. Thompson, Georgina Cox
Journal of Bacteriology (2020) Vol. 202, Iss. 22
Open Access | Times Cited: 63
A comprehensive and high-quality collection of Escherichia coli genomes and their genes
Gal Horesh, Grace A. Blackwell, Gerry Tonkin‐Hill, et al.
Microbial Genomics (2021) Vol. 7, Iss. 2
Open Access | Times Cited: 55
Pandora: nucleotide-resolution bacterial pan-genomics with reference graphs
Rachel Colquhoun, Michael B. Hall, Leandro Lima, et al.
Genome biology (2021) Vol. 22, Iss. 1
Open Access | Times Cited: 50
Page 1 - Next Page

Scroll to top