OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Differential contribution of steady‐state RNA and active transcription in chromatin organization
A. Rasim Barutcu, Benjamin J. Blencowe, John L. Rinn
EMBO Reports (2019) Vol. 20, Iss. 10
Open Access | Times Cited: 76

Showing 1-25 of 76 citing articles:

On the existence and functionality of topologically associating domains
Jonathan A. Beagan, Jennifer E. Phillips‐Cremins
Nature Genetics (2020) Vol. 52, Iss. 1, pp. 8-16
Open Access | Times Cited: 329

RNA promotes the formation of spatial compartments in the nucleus
Sofia A. Quinodoz, Joanna W. Jachowicz, Prashant Bhat, et al.
Cell (2021) Vol. 184, Iss. 23, pp. 5775-5790.e30
Open Access | Times Cited: 300

Transcription organizes euchromatin via microphase separation
Lennart Hilbert, Yuko Sato, Ksenia Kuznetsova, et al.
Nature Communications (2021) Vol. 12, Iss. 1
Open Access | Times Cited: 127

Enhancer–promoter contact formation requires RNAPII and antagonizes loop extrusion
Shu Zhang, Nadine Übelmesser, Mariano Barbieri, et al.
Nature Genetics (2023) Vol. 55, Iss. 5, pp. 832-840
Open Access | Times Cited: 110

Chromatin compartmentalization regulates the response to DNA damage
Coline Arnould, Vincent Rocher, Florian Saur, et al.
Nature (2023) Vol. 623, Iss. 7985, pp. 183-192
Open Access | Times Cited: 90

RNA polymerase II dynamics shape enhancer–promoter interactions
Gilad Barshad, James J. Lewis, Alexandra G. Chivu, et al.
Nature Genetics (2023) Vol. 55, Iss. 8, pp. 1370-1380
Open Access | Times Cited: 77

CTCF shapes chromatin structure and gene expression in health and disease
Bondita Dehingia, Małgorzata Milewska, Marcin Janowski, et al.
EMBO Reports (2022) Vol. 23, Iss. 9
Open Access | Times Cited: 71

RNA is essential for PRC2 chromatin occupancy and function in human pluripotent stem cells
Yicheng Long, Taeyoung Hwang, Anne R. Gooding, et al.
Nature Genetics (2020) Vol. 52, Iss. 9, pp. 931-938
Open Access | Times Cited: 139

RNA polymerase II is required for spatial chromatin reorganization following exit from mitosis
Shu Zhang, Nadine Übelmesser, Nataša Josipović, et al.
Science Advances (2021) Vol. 7, Iss. 43
Open Access | Times Cited: 100

Mechanisms of Chromosome Folding and Nuclear Organization: Their Interplay and Open Questions
Leonid A. Mirny, Job Dekker
Cold Spring Harbor Perspectives in Biology (2021) Vol. 14, Iss. 7, pp. a040147-a040147
Open Access | Times Cited: 93

CTCF as a boundary factor for cohesin-mediated loop extrusion: evidence for a multi-step mechanism
Anders S. Hansen
Nucleus (2020) Vol. 11, Iss. 1, pp. 132-148
Open Access | Times Cited: 91

Transcription-mediated supercoiling regulates genome folding and loop formation
Maria Victoria Neguembor, Laura Martin, Álvaro Castells-García, et al.
Molecular Cell (2021) Vol. 81, Iss. 15, pp. 3065-3081.e12
Open Access | Times Cited: 86

Systematic mapping of nuclear domain-associated transcripts reveals speckles and lamina as hubs of functionally distinct retained introns
A. Rasim Barutcu, Mingkun Wu, Ulrich Braunschweig, et al.
Molecular Cell (2022) Vol. 82, Iss. 5, pp. 1035-1052.e9
Open Access | Times Cited: 69

The lncRNA MARS modulates the epigenetic reprogramming of the marneral cluster in response to ABA
Thomas Roulé, Aurélie Christ, Nosheen Hussain, et al.
Molecular Plant (2022) Vol. 15, Iss. 5, pp. 840-856
Open Access | Times Cited: 41

Active enhancers strengthen insulation by RNA-mediated CTCF binding at chromatin domain boundaries
Zubairul Islam, Bharath Saravanan, Kaivalya Walavalkar, et al.
Genome Research (2023) Vol. 33, Iss. 1, pp. 1-17
Open Access | Times Cited: 32

Role of condensates in modulating DNA repair pathways and its implication for chemoresistance
Giuseppe Dall’Agnese, Alessandra Dall’Agnese, Salman F. Banani, et al.
Journal of Biological Chemistry (2023) Vol. 299, Iss. 6, pp. 104800-104800
Open Access | Times Cited: 28

Genome-wide analysis of the interplay between chromatin-associated RNA and 3D genome organization in human cells
Riccardo Calandrelli, Xingzhao Wen, John Lalith Charles Richard, et al.
Nature Communications (2023) Vol. 14, Iss. 1
Open Access | Times Cited: 24

Genome folding principles uncovered in condensin-depleted mitotic chromosomes
Han Zhao, Yinzhi Lin, En Lin, et al.
Nature Genetics (2024) Vol. 56, Iss. 6, pp. 1213-1224
Closed Access | Times Cited: 16

Opposing Effects of Cohesin and Transcription on CTCF Organization Revealed by Super-resolution Imaging
Bo Gu, Colin J. Comerci, Dannielle G. McCarthy, et al.
Molecular Cell (2020) Vol. 80, Iss. 4, pp. 699-711.e7
Open Access | Times Cited: 60

Architectural RNA in chromatin organization
Jitendra Thakur, Steven Henikoff
Biochemical Society Transactions (2020) Vol. 48, Iss. 5, pp. 1967-1978
Open Access | Times Cited: 51

Mechanical determinants of chromatin topology and gene expression
Rajeev Jha, David Levens, Fedor Kouzine
Nucleus (2022) Vol. 13, Iss. 1, pp. 95-116
Open Access | Times Cited: 36

Active transcription and epigenetic reactions synergistically regulate meso-scale genomic organization
Aayush Kant, Zixian Guo, Vinayak Vinayak, et al.
Nature Communications (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 9

Long non-coding RNAs: roles in cellular stress responses and epigenetic mechanisms regulating chromatin
Jeffrey A. Nickerson, Fatemeh Momen‐Heravi
Nucleus (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 9

Chromatin Remodelers in the 3D Nuclear Compartment
Mauro Magaña-Acosta, Viviana Valadéz-Graham
Frontiers in Genetics (2020) Vol. 11
Open Access | Times Cited: 47

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