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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Yeast metabolic innovations emerged via expanded metabolic network and gene positive selection
Hongzhong Lu, Feiran Li, Le Yuan, et al.
Molecular Systems Biology (2021) Vol. 17, Iss. 10
Open Access | Times Cited: 32

Showing 1-25 of 32 citing articles:

Deep learning-based kcat prediction enables improved enzyme-constrained model reconstruction
Feiran Li, Le Yuan, Hongzhong Lu, et al.
Nature Catalysis (2022) Vol. 5, Iss. 8, pp. 662-672
Open Access | Times Cited: 246
Reconstruction, simulation and analysis of enzyme-constrained metabolic models using GECKO Toolbox 3.0
Yu Chen, Johan Gustafsson, Albert Tafur Rangel, et al.
Nature Protocols (2024) Vol. 19, Iss. 3, pp. 629-667
Closed Access | Times Cited: 33
Genome-scale modeling of yeast metabolism: retrospectives and perspectives
Yu Chen, Feiran Li, Jens Nielsen
FEMS Yeast Research (2022) Vol. 22, Iss. 1
Open Access | Times Cited: 39
Fermentation's pivotal role in shaping the future of plant-based foods: An integrative review of fermentation processes and their impact on sensory and health benefits
Nazanin Abbaspour
Applied Food Research (2024) Vol. 4, Iss. 2, pp. 100468-100468
Open Access | Times Cited: 15
The metabolic domestication syndrome of budding yeast
Roland Tengölics, Balázs Szappanos, Michael Mülleder, et al.
Proceedings of the National Academy of Sciences (2024) Vol. 121, Iss. 11
Open Access | Times Cited: 7
Proteomics and constraint-based modelling reveal enzyme kinetic properties of Chlamydomonas reinhardtii on a genome scale
Marius Arend, David Zimmer, Rudan Xu, et al.
Nature Communications (2023) Vol. 14, Iss. 1
Open Access | Times Cited: 15
HGTphyloDetect: facilitating the identification and phylogenetic analysis of horizontal gene transfer
Le Yuan, Hongzhong Lu, Feiran Li, et al.
Briefings in Bioinformatics (2023) Vol. 24, Iss. 2
Open Access | Times Cited: 14
Advances in constraint-based models: methods for improved predictive power based on resource allocation constraints
Eduard J. Kerkhoven
Current Opinion in Microbiology (2022) Vol. 68, pp. 102168-102168
Open Access | Times Cited: 20
Scaling metabolic model reconstruction up to the pan-genome level: A systematic review and prospective applications to photosynthetic organisms
Marius Arend, Emilian Paulitz, Yunli Eric Hsieh, et al.
Metabolic Engineering (2025) Vol. 90, pp. 67-77
Closed Access
Genome-wide characterization and expression analysis of WRKY family genes in the biosynthesis of triptolide in Tripterygium wilfordii
Limei Tang, Xinyu Qi, J J Chen, et al.
BMC Genomics (2025) Vol. 26, Iss. 1
Open Access
Horizontal gene transfer in yeasts
Paula Gonçalves, Carla Gonçalves
Current Opinion in Genetics & Development (2022) Vol. 76, pp. 101950-101950
Closed Access | Times Cited: 17
Logistic PCA explains differences between genome-scale metabolic models in terms of metabolic pathways
Leopold Zehetner, Diana Széliová, Barbara Kraus, et al.
PLoS Computational Biology (2024) Vol. 20, Iss. 6, pp. e1012236-e1012236
Open Access | Times Cited: 3
Structural and biochemical insights of xylose MFS and SWEET transporters in microbial cell factories: challenges to lignocellulosic hydrolysates fermentation
Iasmin Cartaxo Taveira, Cláudia Batista Carraro, Karoline Maria Vieira Nogueira, et al.
Frontiers in Microbiology (2024) Vol. 15
Open Access | Times Cited: 3
Genome-scale metabolic modeling reveals specific vaginal Lactobacillus strains and their metabolites as key inhibitors of Candida albicans
Tianqi Hu, Ya Meng, Changying Zhao, et al.
Microbiology Spectrum (2025)
Open Access
Reconstruction of genome-scale metabolic models of non-conventional yeasts: current state, challenges, and perspectives
Eduardo Luís Menezes de Almeida, Eduard J. Kerkhoven, Wendel Batista da Silveira
Biotechnology and Bioprocess Engineering (2024) Vol. 29, Iss. 1, pp. 35-67
Closed Access | Times Cited: 1
Metabolomes evolve faster than metabolic network structures
Yu Chen, Feiran Li
Proceedings of the National Academy of Sciences (2024) Vol. 121, Iss. 11
Open Access | Times Cited: 1
A Computational Toolbox to Investigate the Metabolic Potential and Resource Allocation in Fission Yeast
Pranas Grigaitis, Douwe A. J. Grundel, Eunice van Pelt‐KleinJan, et al.
mSystems (2022) Vol. 7, Iss. 4
Open Access | Times Cited: 7
The Role of Metabolism in Shaping Enzyme Structures Over 400 Million Years of Evolution
Oliver Lemke, Benjamin M. Heineike, Sandra Viknander, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 1
Yeast adapts to diverse ecological niches driven by genomics and metabolic reprogramming
Haoyu Wang, Jens Nielsen, Yongjin J. Zhou, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 1
A Pan-Draft Metabolic Model Reflects Evolutionary Diversity across 332 Yeast Species
Hongzhong Lu, Eduard J. Kerkhoven, Jens Nielsen
Biomolecules (2022) Vol. 12, Iss. 11, pp. 1632-1632
Open Access | Times Cited: 6
Genome-scale metabolic models reveal determinants of phenotypic differences in non-Saccharomyces yeasts
Jakob Peder Pettersen, Sandra Castillo, Paula Jouhten, et al.
BMC Bioinformatics (2023) Vol. 24, Iss. 1
Open Access | Times Cited: 3
Chromosome-level genome assembly and characterization of the Calophaca sinica genome
Jianting Cao, Hui Zhu, Yingqi Gao, et al.
DNA Research (2024) Vol. 31, Iss. 3
Open Access
Evaluation of lipid production efficiency using palm oil mill effluent as a carbon source by Lipomyces starkeyi
Nova Rachmadona, Prihardi Kahar, Ario Betha Juanssilfero, et al.
Biomass Conversion and Biorefinery (2024)
Closed Access
Model-Driven Elucidation of Lactose and Galactose Metabolism via Oxidoreductive Pathway in Sungouiella intermedia for Cell Factory Applications
Kameshwara V. R. Peri, Iván Domenzain, Hanna Alalam, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access
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