OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

FluorescenceIn SituHybridization and Optical Mapping to Correct Scaffold Arrangement in the Tomato Genome
L.A. Shearer, Lorinda K. Anderson, Hans de Jong, et al.
G3 Genes Genomes Genetics (2014) Vol. 4, Iss. 8, pp. 1395-1405
Open Access | Times Cited: 85

Showing 1-25 of 85 citing articles:

Phylogenomics Reveals Three Sources of Adaptive Variation during a Rapid Radiation
James B. Pease, David C. Haak, Matthew W. Hahn, et al.
PLoS Biology (2016) Vol. 14, Iss. 2, pp. e1002379-e1002379
Open Access | Times Cited: 431

The Juicebox Assembly Tools module facilitatesde novoassembly of mammalian genomes with chromosome-length scaffolds for under $1000
Olga Dudchenko, Muhammad S. Shamim, Sanjit Singh Batra, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2018)
Open Access | Times Cited: 266

An improved de novo assembly and annotation of the tomato reference genome using single-molecule sequencing, Hi-C proximity ligation and optical maps
Prashant S. Hosmani, Mirella Flores-Gonzalez, Henri van de Geest, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2019)
Open Access | Times Cited: 232

Single-Molecule Real-Time Sequencing Combined with Optical Mapping Yields Completely Finished Fungal Genome
Luigi Faino, Michael Seidl, Erwin Datema, et al.
mBio (2015) Vol. 6, Iss. 4
Open Access | Times Cited: 182

Analytical workflow of double-digest restriction site-associated DNA sequencing based on empirical andin silicooptimization in tomato
Kenta Shirasawa, Hideki Hirakawa, Sachiko Isobe
DNA Research (2016) Vol. 23, Iss. 2, pp. 145-153
Open Access | Times Cited: 130

Mind the gap; seven reasons to close fragmented genome assemblies
Bart P. H. J. Thomma, Michael Seidl, Xiaoqian Shi‐Kunne, et al.
Fungal Genetics and Biology (2015) Vol. 90, pp. 24-30
Closed Access | Times Cited: 124

BioNano genome mapping of individual chromosomes supports physical mapping and sequence assembly in complex plant genomes
Helena Staňková, Alex Hastie, Saki Chan, et al.
Plant Biotechnology Journal (2016) Vol. 14, Iss. 7, pp. 1523-1531
Open Access | Times Cited: 109

New Approaches for Genome Assembly and Scaffolding
Edward S. Rice, Richard E. Green
Annual Review of Animal Biosciences (2018) Vol. 7, Iss. 1, pp. 17-40
Closed Access | Times Cited: 102

Advances in genomics for adapting crops to climate change
Armin Scheben, Yuxuan Yuan, David Edwards
Current Plant Biology (2016) Vol. 6, pp. 2-10
Open Access | Times Cited: 100

Chromosome‐scale pseudomolecules refined by optical, physical and genetic maps in flax
Frank M. You, Jin Xiao, Pingchuan Li, et al.
The Plant Journal (2018) Vol. 95, Iss. 2, pp. 371-384
Open Access | Times Cited: 93

Chromosomics: Bridging the Gap between Genomes and Chromosomes
Janine E. Deakin, Sally Potter, Rachel J. O’Neill, et al.
Genes (2019) Vol. 10, Iss. 8, pp. 627-627
Open Access | Times Cited: 93

Sequencing‐Based Bin Map Construction of a Tomato Mapping Population, Facilitating High‐Resolution Quantitative Trait Loci Detection
Itay Gonda, Hamid Ashrafi, David Lyon, et al.
The Plant Genome (2018) Vol. 12, Iss. 1
Open Access | Times Cited: 90

Improvements in Genomic Technologies: Application to Crop Genomics
Yuxuan Yuan, Philipp E. Bayer, Jacqueline Batley, et al.
Trends in biotechnology (2017) Vol. 35, Iss. 6, pp. 547-558
Closed Access | Times Cited: 89

The relationship of recombination rate, genome structure, and patterns of molecular evolution across angiosperms
George P. Tiley, J. Gordon Burleigh
BMC Evolutionary Biology (2015) Vol. 15, Iss. 1
Open Access | Times Cited: 88

The de novo genome assembly and annotation of a female domestic dromedary of North African origin
Robert R. Fitak, Elmira Mohandesan, Jukka Corander, et al.
Molecular Ecology Resources (2015) Vol. 16, Iss. 1, pp. 314-324
Open Access | Times Cited: 61

Optical mapping in plant comparative genomics
Haibao Tang, Eric Lyons, Christopher D. Town
GigaScience (2015) Vol. 4, Iss. 1
Open Access | Times Cited: 55

The map‐based genome sequence of Spirodela polyrhiza aligned with its chromosomes, a reference for karyotype evolution
Hieu X. Cao, Giang T. H. Vu, Wenqin Wang, et al.
New Phytologist (2015) Vol. 209, Iss. 1, pp. 354-363
Open Access | Times Cited: 43

Comparison of Marker-Based Genomic Estimated Breeding Values and Phenotypic Evaluation for Selection of Bacterial Spot Resistance in Tomato
Debora Liabeuf, Sung‐Chur Sim, David M. Francis
Phytopathology (2017) Vol. 108, Iss. 3, pp. 392-401
Open Access | Times Cited: 40

Candidate gene selection and detailed morphological evaluations offs8.1, a quantitative trait locus controlling tomato fruit shape
Liang Sun, Gustavo Rodríguez, Josh Clevenger, et al.
Journal of Experimental Botany (2015) Vol. 66, Iss. 20, pp. 6471-6482
Open Access | Times Cited: 38

Short interspersed nuclear elements (SINEs) are abundant in Solanaceae and have a family‐specific impact on gene structure and genome organization
Kathrin M. Seibt, Torsten Wenke, Katja Muders, et al.
The Plant Journal (2016) Vol. 86, Iss. 3, pp. 268-285
Open Access | Times Cited: 37

Classification and phylogenetic analyses of the Arabidopsis and tomato G-type lectin receptor kinases
Marcella Teixeira, Alex Rajewski, Jiangman He, et al.
BMC Genomics (2018) Vol. 19, Iss. 1
Open Access | Times Cited: 35

Cytogenetic mapping with centromeric bacterial artificial chromosomes contigs shows that this recombination‐poor region comprises more than half of barley chromosome 3H
Lala Aliyeva‐Schnorr, Sebastian Beier, Miroslava Karafiátová, et al.
The Plant Journal (2015) Vol. 84, Iss. 2, pp. 385-394
Open Access | Times Cited: 34

Draft genome of Tanacetum cinerariifolium, the natural source of mosquito coil
Takanori Yamashiro, Akira Shiraishi, Honoo Satake, et al.
Scientific Reports (2019) Vol. 9, Iss. 1
Open Access | Times Cited: 32

The Physical Genome Mapping ofAnopheles albimanusCorrected Scaffold Misassemblies and Identified Interarm Rearrangements in GenusAnopheles
Gleb N. Artemov, Ashley Peery, Xiaofang Jiang, et al.
G3 Genes Genomes Genetics (2017) Vol. 7, Iss. 1, pp. 155-164
Open Access | Times Cited: 29

Multiplex CRISPR-Cas9 editing of DNA methyltransferases in rice uncovers a class of non-CG methylation specific for GC-rich regions
Daoheng Hu, Yiming Yu, Chun Wang, et al.
The Plant Cell (2021) Vol. 33, Iss. 9, pp. 2950-2964
Open Access | Times Cited: 22

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