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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

vegan: Community Ecology Package
Jari Oksanen, Gavin L. Simpson, F. Guillaume Blanchet, et al.
(2001)
Closed Access | Times Cited: 22188

Showing 1-25 of 22188 citing articles:

phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data
Paul J. McMurdie, Susan Holmes
PLoS ONE (2013) Vol. 8, Iss. 4, pp. e61217-e61217
Open Access | Times Cited: 17253
Picante: R tools for integrating phylogenies and ecology
Steven W. Kembel, Peter D. Cowan, Matthew R. Helmus, et al.
Bioinformatics (2010) Vol. 26, Iss. 11, pp. 1463-1464
Open Access | Times Cited: 5463
The Genotype-Tissue Expression (GTEx) pilot analysis: Multitissue gene regulation in humans
Kristin G. Ardlie, David S. DeLuca, Ayellet V. Segrè, et al.
Science (2015) Vol. 348, Iss. 6235, pp. 648-660
Open Access | Times Cited: 5042
Waste Not, Want Not: Why Rarefying Microbiome Data Is Inadmissible
Paul J. McMurdie, Susan Holmes
PLoS Computational Biology (2014) Vol. 10, Iss. 4, pp. e1003531-e1003531
Open Access | Times Cited: 2708
The global spectrum of plant form and function
Sandra Díaz, Jens Kattge, Johannes H. C. Cornelissen, et al.
Nature (2015) Vol. 529, Iss. 7585, pp. 167-171
Open Access | Times Cited: 2675
Poppr: an R package for genetic analysis of populations with clonal, partially clonal, and/or sexual reproduction
Zhian N. Kamvar, Javier F. Tabima, Niklaus J. Grünwald
PeerJ (2014) Vol. 2, pp. e281-e281
Open Access | Times Cited: 2616
Using network analysis to explore co-occurrence patterns in soil microbial communities
Albert Barberán, Scott T. Bates, Emilio O. Casamayor, et al.
The ISME Journal (2011) Vol. 6, Iss. 2, pp. 343-351
Open Access | Times Cited: 2486
A communal catalogue reveals Earth’s multiscale microbial diversity
Luke Thompson, Jon G. Sanders, Daniel McDonald, et al.
Nature (2017) Vol. 551, Iss. 7681, pp. 457-463
Open Access | Times Cited: 2339
Environment dominates over host genetics in shaping human gut microbiota
Daphna Rothschild, Omer Weissbrod, Elad Barkan, et al.
Nature (2018) Vol. 555, Iss. 7695, pp. 210-215
Open Access | Times Cited: 2304
betapart: an R package for the study of beta diversity
Andrés Baselga, C. David L. Orme
Methods in Ecology and Evolution (2012) Vol. 3, Iss. 5, pp. 808-812
Closed Access | Times Cited: 2040
Population-level analysis of gut microbiome variation
Gwen Falony, Marie Joossens, Sara Vieira‐Silva, et al.
Science (2016) Vol. 352, Iss. 6285, pp. 560-564
Closed Access | Times Cited: 2002
Pan-cancer patterns of somatic copy number alteration
Travis Zack, Steven E. Schumacher, Scott L. Carter, et al.
Nature Genetics (2013) Vol. 45, Iss. 10, pp. 1134-1140
Open Access | Times Cited: 1799
Human gut microbes impact host serum metabolome and insulin sensitivity
Helle K. Pedersen, Valborg Guðmundsdóttir, Henrik Bjørn Nielsen, et al.
Nature (2016) Vol. 535, Iss. 7612, pp. 376-381
Closed Access | Times Cited: 1792
Normalization and microbial differential abundance strategies depend upon data characteristics
Sophie Weiss, Zhenjiang Zech Xu, Shyamal D. Peddada, et al.
Microbiome (2017) Vol. 5, Iss. 1
Open Access | Times Cited: 1761
Supplementation with Akkermansia muciniphila in overweight and obese human volunteers: a proof-of-concept exploratory study
Clara Depommier, Amandine Everard, Céline Druart, et al.
Nature Medicine (2019) Vol. 25, Iss. 7, pp. 1096-1103
Open Access | Times Cited: 1723
Altering the Intestinal Microbiota during a Critical Developmental Window Has Lasting Metabolic Consequences
Laura M. Cox, Shingo Yamanishi, Jiho Sohn, et al.
Cell (2014) Vol. 158, Iss. 4, pp. 705-721
Open Access | Times Cited: 1707
Dynamic root exudate chemistry and microbial substrate preferences drive patterns in rhizosphere microbial community assembly
Kateryna Zhalnina, Katherine B. Louie, Zhao Hao, et al.
Nature Microbiology (2018) Vol. 3, Iss. 4, pp. 470-480
Open Access | Times Cited: 1666
Population-based metagenomics analysis reveals markers for gut microbiome composition and diversity
Alexandra Zhernakova, Alexander Kurilshikov, Marc Jan Bonder, et al.
Science (2016) Vol. 352, Iss. 6285, pp. 565-569
Open Access | Times Cited: 1622
Early infancy microbial and metabolic alterations affect risk of childhood asthma
Marie‐Claire Arrieta, Leah T. Stiemsma, Pedro A. Dimitriu, et al.
Science Translational Medicine (2015) Vol. 7, Iss. 307
Open Access | Times Cited: 1536
A comparative ethnobotany of Khevsureti, Samtskhe-Javakheti, Tusheti, Svaneti, and Racha-Lechkhumi, Republic of Georgia (Sakartvelo), Caucasus
Rainer W. Bussmann, Narel Y. Paniagua-Zambrana, Shalva Sikharulidze, et al.
Journal of Ethnobiology and Ethnomedicine (2016) Vol. 12, Iss. 1
Open Access | Times Cited: 1428
A new versatile primer set targeting a short fragment of the mitochondrial COI region for metabarcoding metazoan diversity: application for characterizing coral reef fish gut contents
Matthieu Leray, Joy Yang, Chris Meyer, et al.
Frontiers in Zoology (2013) Vol. 10, Iss. 1, pp. 34-34
Open Access | Times Cited: 1380
Global patterns and predictors of marine biodiversity across taxa
Derek P. Tittensor, Camilo Mora, Walter Jetz, et al.
Nature (2010) Vol. 466, Iss. 7310, pp. 1098-1101
Closed Access | Times Cited: 1371
Rhizosphere microbiome assemblage is affected by plant development
Jacqueline M. Chaparro, Dayakar V. Badri, Jorge M. Vivanco
The ISME Journal (2013) Vol. 8, Iss. 4, pp. 790-803
Open Access | Times Cited: 1345
Climate warming enhances microbial network complexity and stability
Mengting Yuan, Xue Guo, Linwei Wu, et al.
Nature Climate Change (2021) Vol. 11, Iss. 4, pp. 343-348
Closed Access | Times Cited: 1336
Genome sequences of rare, uncultured bacteria obtained by differential coverage binning of multiple metagenomes
Mads Albertsen, Philip Hugenholtz, Adam Skarshewski, et al.
Nature Biotechnology (2013) Vol. 31, Iss. 6, pp. 533-538
Closed Access | Times Cited: 1241
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