OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Before and after AlphaFold2: An overview of protein structure prediction
Letícia M. F. Bertoline, Angélica N. Lima, José Eduardo Krieger, et al.
Frontiers in Bioinformatics (2023) Vol. 3
Open Access | Times Cited: 151

Showing 1-25 of 151 citing articles:

The Coming of Age of AI/ML in Drug Discovery, Development, Clinical Testing, and Manufacturing: The FDA Perspectives
Sarfaraz K. Niazi
Drug Design Development and Therapy (2023) Vol. Volume 17, pp. 2691-2725
Open Access | Times Cited: 46

Easy and accurate protein structure prediction using ColabFold
Gyuri Kim, Sewon Lee, Eli Levy Karin, et al.
Nature Protocols (2024)
Closed Access | Times Cited: 18

AI-Driven Deep Learning Techniques in Protein Structure Prediction
Lingtao Chen, Qiaomu Li, Kazi Fahim Ahmad Nasif, et al.
International Journal of Molecular Sciences (2024) Vol. 25, Iss. 15, pp. 8426-8426
Open Access | Times Cited: 17

Large language models in plant biology
Hilbert Yuen In Lam, Xing Er Ong, Marek Mutwil
Trends in Plant Science (2024) Vol. 29, Iss. 10, pp. 1145-1155
Open Access | Times Cited: 16

Review of AlphaFold 3: Transformative Advances in Drug Design and Therapeutics
Dev Desai, Shiv V Kantliwala, Jyothi Vybhavi, et al.
Cureus (2024)
Open Access | Times Cited: 16

Using AlphaFold Predictions in Viral Research
Daria Gutnik, Peter V. Evseev, Konstantin A. Miroshnikov, et al.
Current Issues in Molecular Biology (2023) Vol. 45, Iss. 4, pp. 3705-3732
Open Access | Times Cited: 23

Precision enzyme discovery through targeted mining of metagenomic data
Shohreh Ariaeenejad, Javad Gharechahi, Mehdi Foroozandeh Shahraki, et al.
Natural Products and Bioprospecting (2024) Vol. 14, Iss. 1
Open Access | Times Cited: 15

Old Moats for New Models: Openness, Control, and Competition in Generative Ai
Pierre Azoulay, Joshua Krieger, Abhishek Nagaraj
SSRN Electronic Journal (2024)
Closed Access | Times Cited: 14

Virtual Screening of Peptide Libraries: The Search for Peptide-Based Therapeutics Using Computational Tools
Marian Vincenzi, Flavia Anna Mercurio, Marilisa Leone
International Journal of Molecular Sciences (2024) Vol. 25, Iss. 3, pp. 1798-1798
Open Access | Times Cited: 13

Revolutionizing protein–protein interaction prediction with deep learning
Jing Zhang, Jesse Durham, Qian Cong
Current Opinion in Structural Biology (2024) Vol. 85, pp. 102775-102775
Closed Access | Times Cited: 13

Overview of AlphaFold2 and breakthroughs in overcoming its limitations
Lei Wang, Zehua Wen, Shiwei Liu, et al.
Computers in Biology and Medicine (2024) Vol. 176, pp. 108620-108620
Closed Access | Times Cited: 13

Extremozymes: Challenges and opportunities on the road to novel enzymes production
Diego I.J. Salas-Bruggink, Jorge Sánchez-San Martín, Gabriel Leiva, et al.
Process Biochemistry (2024) Vol. 143, pp. 323-336
Closed Access | Times Cited: 9

Directed Evolution of Protoglobin Optimizes the Enzyme Electric Field
Shobhit S. Chaturvedi, Santiago Vargas, Pujan Ajmera, et al.
Journal of the American Chemical Society (2024) Vol. 146, Iss. 24, pp. 16670-16680
Open Access | Times Cited: 8

The Physics-AI Dialogue in Drug Design
Pablo Andrés Vargas-Rosales, Amedeo Caflisch
RSC Medicinal Chemistry (2025)
Open Access | Times Cited: 1

Advancing vaccine development in genomic era: A paradigm shift in vaccine discovery
Miraj Ud din, Xiaohui Liu, Hui Jiang, et al.
Progress in Biomedical Engineering (2025) Vol. 7, Iss. 2, pp. 022004-022004
Closed Access | Times Cited: 1

Leveraging protein structural information to improve variant effect prediction
Lukas Gerasimavicius, Sarah A. Teichmann, Joseph A. Marsh
Current Opinion in Structural Biology (2025) Vol. 92, pp. 103023-103023
Open Access | Times Cited: 1

Molecular Engineering of Alginate Lyases and the Potential Agricultural Applications of Their Enzymatic Products
Yongshang Ye, Yu Zhang, Ying Zhou, et al.
Journal of Agricultural and Food Chemistry (2025)
Closed Access | Times Cited: 1

Peptides of a Feather: How Computation Is Taking Peptide Therapeutics under Its Wing
Tom Kazmirchuk, Calvin Bradbury-Jost, Taylor Ann Withey, et al.
Genes (2023) Vol. 14, Iss. 6, pp. 1194-1194
Open Access | Times Cited: 17

Designing of a multi-epitopes based vaccine against Haemophilius parainfluenzae and its validation through integrated computational approaches
Sana Abdul Ghaffar, Haneen Tahir, Sher Muhammad, et al.
Frontiers in Immunology (2024) Vol. 15
Open Access | Times Cited: 8

Reliability of AlphaFold2 Models in Virtual Drug Screening: A Focus on Selected Class A GPCRs
Nada K. Alhumaid, Essam A. Tawfik
International Journal of Molecular Sciences (2024) Vol. 25, Iss. 18, pp. 10139-10139
Open Access | Times Cited: 6

Structural Modeling of Nanobodies: A Benchmark of State-of-the-Art Artificial Intelligence Programs
Mario S. Valdés‐Tresanco, Mario E. Valdés‐Tresanco, Daiver E. Jiménez-Gutiérrez, et al.
Molecules (2023) Vol. 28, Iss. 10, pp. 3991-3991
Open Access | Times Cited: 16

Recent Advances and Challenges in Protein Structure Prediction
Chunxiang Peng, Liang Fang, Yuhao Xia, et al.
Journal of Chemical Information and Modeling (2023) Vol. 64, Iss. 1, pp. 76-95
Closed Access | Times Cited: 16

Petascale Homology Search for Structure Prediction
Sewon Lee, Gyuri Kim, Eli Levy Karin, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 14

Epitope Identification of an mGlu5 Receptor Nanobody Using Physics-Based Molecular Modeling and Deep Learning Techniques
Floriane Eshak, Léo Pion, Pauline Scholler, et al.
Journal of Chemical Information and Modeling (2024) Vol. 64, Iss. 11, pp. 4436-4461
Closed Access | Times Cited: 5

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