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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

From System Modeling to System Analysis: The Impact of Resolution Level and Resolution Distribution in the Computer-Aided Investigation of Biomolecules
Marco Giulini, Marta Rigoli, Giovanni Mattiotti, et al.
Frontiers in Molecular Biosciences (2021) Vol. 8
Open Access | Times Cited: 36

Showing 1-25 of 36 citing articles:

Bottom-up Coarse-Graining: Principles and Perspectives
Jaehyeok Jin, Alexander J. Pak, Aleksander E. P. Durumeric, et al.
Journal of Chemical Theory and Computation (2022) Vol. 18, Iss. 10, pp. 5759-5791
Open Access | Times Cited: 171
Two decades of Martini: Better beads, broader scope
‪Siewert J. Marrink, Luca Monticelli, Manuel N. Melo, et al.
Wiley Interdisciplinary Reviews Computational Molecular Science (2022) Vol. 13, Iss. 1
Open Access | Times Cited: 165
Perspective: Advances, Challenges, and Insight for Predictive Coarse-Grained Models
W. G. Noid
The Journal of Physical Chemistry B (2023) Vol. 127, Iss. 19, pp. 4174-4207
Open Access | Times Cited: 80
Pragmatic Coarse-Graining of Proteins: Models and Applications
Luís Borges-Araújo, Ilias Patmanidis, Akhil Pratap Singh, et al.
Journal of Chemical Theory and Computation (2023) Vol. 19, Iss. 20, pp. 7112-7135
Open Access | Times Cited: 48
A Multiscale Analysis of the CzrA Transcription Repressor Highlights the Allosteric Changes Induced by Metal Ion Binding
Marta Rigoli, Raffaello Potestio, Roberto Menichetti
The Journal of Physical Chemistry B (2025)
Open Access | Times Cited: 1
Theory and Practice of Coarse-Grained Molecular Dynamics of Biologically Important Systems
Adam Liwo, Cezary Czaplewski, Adam K. Sieradzan, et al.
Biomolecules (2021) Vol. 11, Iss. 9, pp. 1347-1347
Open Access | Times Cited: 45
Continuous Manufacturing and Molecular Modeling of Pharmaceutical Amorphous Solid Dispersions
Amritha G. Nambiar, Maan Singh, Abhishek R. Mali, et al.
AAPS PharmSciTech (2022) Vol. 23, Iss. 7
Closed Access | Times Cited: 32
Ensuring thermodynamic consistency with invertible coarse-graining
Shriram Chennakesavalu, David J. Toomer, Grant M. Rotskoff
The Journal of Chemical Physics (2023) Vol. 158, Iss. 12
Open Access | Times Cited: 22
A review on mechanical and material characterisation through molecular dynamics using large-scale atomic/molecular massively parallel simulator (LAMMPS)
S. Gowthaman
Functional Composites and Structures (2023) Vol. 5, Iss. 1, pp. 012005-012005
Closed Access | Times Cited: 18
Computational models for studying physical instabilities in high concentration biotherapeutic formulations
Marco A. Blanco
mAbs (2022) Vol. 14, Iss. 1
Open Access | Times Cited: 23
Optimization of parallel implementation ofUNRESpackage for coarse‐grained simulations to treat large proteins
Adam K. Sieradzan, Jordi Sans‐Duñó, Emilia A. Lubecka, et al.
Journal of Computational Chemistry (2022) Vol. 44, Iss. 4, pp. 602-625
Closed Access | Times Cited: 21
Multi-GPU UNRES for scalable coarse-grained simulations of very large protein systems
Krzysztof M. Ocetkiewicz, Cezary Czaplewski, Henryk Krawczyk, et al.
Computer Physics Communications (2024) Vol. 298, pp. 109112-109112
Open Access | Times Cited: 4
Surveying the energy landscape of coarse-grained mappings
Katherine M. Kidder, M. Scott Shell, W. G. Noid
The Journal of Chemical Physics (2024) Vol. 160, Iss. 5
Open Access | Times Cited: 3
Energetic and entropic considerations for coarse-graining
Katherine M. Kidder, Ryan J. Szukalo, W. G. Noid
The European Physical Journal B (2021) Vol. 94, Iss. 7
Closed Access | Times Cited: 23
Developing Hybrid All-Atom and Ultra-Coarse-Grained Models to Investigate Taxol-Binding and Dynein Interactions on Microtubules
Jinyin Zha, Fei Xia
Journal of Chemical Theory and Computation (2023) Vol. 19, Iss. 16, pp. 5621-5632
Closed Access | Times Cited: 7
EXCOGITO, an Extensible Coarse-Graining Toolbox for the Investigation of Biomolecules by Means of Low-Resolution Representations
Marco Giulini, Raffaele Fiorentini, Luca Tubiana, et al.
Journal of Chemical Information and Modeling (2024) Vol. 64, Iss. 12, pp. 4912-4927
Closed Access | Times Cited: 2
A journey through mapping space: characterising the statistical and metric properties of reduced representations of macromolecules
Roberto Menichetti, Marco Giulini, Raffaello Potestio
The European Physical Journal B (2021) Vol. 94, Iss. 10
Open Access | Times Cited: 14
Coarse-grained models for local density gradients
Michael R. DeLyser, W. G. Noid
The Journal of Chemical Physics (2021) Vol. 156, Iss. 3
Open Access | Times Cited: 13
Making sense of complex systems through resolution, relevance, and mapping entropy
Roi Holtzman, Marco Giulini, Raffaello Potestio
Physical review. E (2022) Vol. 106, Iss. 4
Open Access | Times Cited: 9
Fast, Accurate, and System-Specific Variable-Resolution Modeling of Proteins
Raffaele Fiorentini, Thomas Tarenzi, Raffaello Potestio
Journal of Chemical Information and Modeling (2023) Vol. 63, Iss. 4, pp. 1260-1275
Open Access | Times Cited: 5
A temperature-dependent length-scale for transferable local density potentials
Ryan J. Szukalo, W. G. Noid
The Journal of Chemical Physics (2023) Vol. 159, Iss. 7
Closed Access | Times Cited: 4
ARCTIC-3D: automatic retrieval and clustering of interfaces in complexes from 3D structural information
Marco Giulini, Rodrigo V. Honorato, Jesús L. Rivera, et al.
Communications Biology (2024) Vol. 7, Iss. 1
Open Access | Times Cited: 1
Rigorous Progress in Coarse-Graining
W. G. Noid, Ryan J. Szukalo, Katherine M. Kidder, et al.
Annual Review of Physical Chemistry (2024) Vol. 75, Iss. 1, pp. 21-45
Closed Access | Times Cited: 1
Analysis of mapping atomic models to coarse-grained resolution
Katherine M. Kidder, W. G. Noid
The Journal of Chemical Physics (2024) Vol. 161, Iss. 13
Closed Access | Times Cited: 1
Targeting the Weak Spot: Preferential Disruption of Bacterial Poles by Janus Nanoparticles
Thanh Danh Nguyen, Swagata Bhattacharyya, Hunter Richman, et al.
Nano Letters (2024)
Closed Access | Times Cited: 1
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