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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

ecc_finder: A Robust and Accurate Tool for Detecting Extrachromosomal Circular DNA From Sequencing Data
Panpan Zhang, Haoran Peng, Christel Llauro, et al.
Frontiers in Plant Science (2021) Vol. 12
Open Access | Times Cited: 57

Showing 1-25 of 57 citing articles:

Extrachromosomal circular DNA: biogenesis, structure, functions and diseases
Ludi Yang, Ruobing Jia, Tongxin Ge, et al.
Signal Transduction and Targeted Therapy (2022) Vol. 7, Iss. 1
Open Access | Times Cited: 59
Extrachromosomal circular DNA and structural variants highlight genome instability in Arabidopsis epigenetic mutants
Panpan Zhang, Assane Mbodj, Abirami Soundiramourtty, et al.
Nature Communications (2023) Vol. 14, Iss. 1
Open Access | Times Cited: 28
Dynamics of extrachromosomal circular DNA in rice
Jundong Zhuang, Yaoxin Zhang, Congcong Zhou, et al.
Nature Communications (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 15
Extrachromosomal circular DNA: A neglected nucleic acid molecule in plants
Haoran Peng, Marie Mirouze, Etienne Bucher
Current Opinion in Plant Biology (2022) Vol. 69, pp. 102263-102263
Closed Access | Times Cited: 35
Chromosome-scale assemblies of Acanthamoeba castellanii genomes provide insights into Legionella pneumophila infection–related chromatin reorganization
Cyril Matthey-Doret, Morgan Colp, Pedro Escoll, et al.
Genome Research (2022) Vol. 32, Iss. 9, pp. 1698-1710
Open Access | Times Cited: 32
eccDNA-pipe: an integrated pipeline for identification, analysis and visualization of extrachromosomal circular DNA from high-throughput sequencing data
Minghao Fang, Jingwen Fang, Songwen Luo, et al.
Briefings in Bioinformatics (2024) Vol. 25, Iss. 2
Open Access | Times Cited: 7
Extrachromosomal circular DNA: Current status and future prospects
Yiheng Zhao, Linchan Yu, Shuchen Zhang, et al.
eLife (2022) Vol. 11
Open Access | Times Cited: 27
CReSIL: accurate identification of extrachromosomal circular DNA from long-read sequences
Visanu Wanchai, Piroon Jenjaroenpun, Thongpan Leangapichart, et al.
Briefings in Bioinformatics (2022) Vol. 23, Iss. 6
Open Access | Times Cited: 26
Reconstructing extrachromosomal DNA structural heterogeneity from long-read sequencing data using Decoil
Mădălina Giurgiu, Nadine Wittstruck, Elias Rodríguez-Fos, et al.
Genome Research (2024) Vol. 34, Iss. 9, pp. 1355-1364
Open Access | Times Cited: 6
Comparative analysis of methodologies for detecting extrachromosomal circular DNA
Xiaolian Gao, Ke Liu, Songwen Luo, et al.
Nature Communications (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 5
Advances in sequencing-based studies of microDNA and ecDNA: Databases, identification methods, and integration with single-cell analysis
Rong Jiang, Manqiu Yang, Shufan Zhang, et al.
Computational and Structural Biotechnology Journal (2023) Vol. 21, pp. 3073-3080
Open Access | Times Cited: 12
Extrachromosomal DNA (ecDNA) in cancer: mechanisms, functions, and clinical implications
Yucheng Dong, Qi He, Xinyu Chen, et al.
Frontiers in Oncology (2023) Vol. 13
Open Access | Times Cited: 12
Composition and Structure of Arabidopsis thaliana Extrachromosomal Circular DNAs Revealed by Nanopore Sequencing
Pavel Merkulov, Egorova Ea, Ilya Kirov
Plants (2023) Vol. 12, Iss. 11, pp. 2178-2178
Open Access | Times Cited: 11
Skeletal Muscles of Sedentary and Physically Active Aged People Have Distinctive Genic Extrachromosomal Circular DNA Profiles
Daniela Gerovska, Marcos J. Araúzo‐Bravo
International Journal of Molecular Sciences (2023) Vol. 24, Iss. 3, pp. 2736-2736
Open Access | Times Cited: 10
Short human eccDNAs are predictable from sequences
Kai-Li Chang, Jiahong Chen, Tzu‐Chieh Lin, et al.
Briefings in Bioinformatics (2023) Vol. 24, Iss. 3
Closed Access | Times Cited: 10
Innovative insights into extrachromosomal circular DNAs in gynecologic tumors and reproduction
Ning Wu, Ling Wei, Zhipeng Zhu, et al.
Protein & Cell (2023) Vol. 15, Iss. 1, pp. 6-20
Open Access | Times Cited: 10
Insights into Extrachromosomal DNA in Cancer: Biogenesis, Methodologies, Functions, and Therapeutic Potential
Xudong Mao, Guocheng Rao, Gonghui Li, et al.
Advanced Biology (2025)
Closed Access
Bhendi Yellow Vein Mosaic Virus Infection Alters Extrachromosomal Circular DNA Profiles and May Contribute to the Current Understanding of Begomoviral Genome Dynamics and Disease Complexity
Gopal Pandi
(2025)
Closed Access
Identification of eccDNA in Extracellular Vesicles Derived from Human Dermal Fibroblasts Through Nanopore Sequencing
Bianca Simonassi-Paiva, José Magno Queiroz Luz, Julia Hellena Mendes Ribeiro, et al.
International Journal of Molecular Sciences (2025) Vol. 26, Iss. 9, pp. 4144-4144
Open Access
Adaptive dynamics of extrachromosomal circular DNA in rice under nutrient stress
Hanfang Ni, Lenin Yong‐Villalobos, Mian Gu, et al.
Nature Communications (2025) Vol. 16, Iss. 1
Open Access
The extrachromosomal circular DNAs of the rice blast pathogen Magnaporthe oryzae contain a wide variety of LTR retrotransposons, genes, and effectors
Pierre M. Joubert, Ksenia V. Krasileva
BMC Biology (2022) Vol. 20, Iss. 1
Open Access | Times Cited: 15
Investigating cellular heterogeneity at the single-cell level by the flexible and mobile extrachromosomal circular DNA
Jiajinlong Kang, Yulin Dai, Jinze Li, et al.
Computational and Structural Biotechnology Journal (2023) Vol. 21, pp. 1115-1121
Open Access | Times Cited: 8
Microhomology-mediated circular DNA formation from oligonucleosomal fragments during spermatogenesis
Jun Hu, Zhe Zhang, Sai Jin Xiao, et al.
eLife (2023) Vol. 12
Open Access | Times Cited: 8
FLED: a full-length eccDNA detector for long-reads sequencing data
Fu‐Yu Li, Wenlong Ming, Wenxiang Lu, et al.
Briefings in Bioinformatics (2023) Vol. 24, Iss. 6
Open Access | Times Cited: 8
Methods, bioinformatics tools and databases in ecDNA research: An overview
Xinyu Zhao, Huan Zhao, Yupeng Liu, et al.
Computers in Biology and Medicine (2023) Vol. 167, pp. 107680-107680
Closed Access | Times Cited: 6
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